Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 GPR143P-201ENST00000434155 205 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC004383.1-201ENST00000438135 289 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 RNU7-26P-201ENST00000458980 63 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 MTND4P2-201ENST00000507767 1203 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 RBBP4P6-201ENST00000508098 202 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 MTCYBP20-201ENST00000524239 1129 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AP001646.1-201ENST00000527936 915 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC023824.2-201ENST00000566185 400 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC234778.2-201ENST00000566241 354 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 BNIP3P22-201ENST00000593399 556 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC245014.2-201ENST00000603689 287 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC064872.1-201ENST00000604823 1072 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 AC246785.4-201ENST00000605374 287 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 YPEL5P2-201ENST00000605553 359 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 OR2AS2P-201ENST00000606902 342 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 U6.114-201ENST00000636407 96 ntBASIC2.44□□□□□ -2.02
FOXA2Q9Y261 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
FOXA2Q9Y261 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 MIR208A-201ENST00000362287 71 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 RNU6-858P-201ENST00000362436 107 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 SNORA38-201ENST00000363946 132 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 MIR518D-201ENST00000385014 87 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AL365338.1-201ENST00000422282 858 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 RPL30P4-201ENST00000429309 333 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 MTATP6P16-201ENST00000434543 526 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 RPS3AP12-201ENST00000443616 753 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC004924.1-201ENST00000480160 781 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC022493.1-201ENST00000492984 337 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC008716.1-201ENST00000511084 513 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC112206.3-201ENST00000514578 389 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC010186.2-204ENST00000537668 439 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC138761.3-201ENST00000579993 334 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 UBL5P2-201ENST00000583788 219 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC008521.1-201ENST00000587471 187 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC087045.1-201ENST00000605856 382 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC069294.1-201ENST00000608397 350 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC011890.2-201ENST00000613393 294 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 Z99129.2-201ENST00000619967 314 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC026422.1-201ENST00000623961 452 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 MIR3651-201ENST00000630427 90 ntBASIC2.43□□□□□ -2.02
FOXA2Q9Y261 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
FOXA2Q9Y261 AL355596.1-201ENST00000565399 3996 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AC009487.2-201ENST00000420969 6821 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
FOXA2Q9Y261 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
FOXA2Q9Y261 RNU1-100P-201ENST00000365255 165 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 SNORA75B-201ENST00000384053 137 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 RNU6-1179P-201ENST00000384667 107 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 RNU6-1072P-201ENST00000384703 107 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 RNY3P9-201ENST00000384727 106 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 RNU6-443P-201ENST00000384780 107 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 SNORD67-201ENST00000390833 111 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AL139039.1-201ENST00000401900 692 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 RNU6-248P-201ENST00000410720 107 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 MTND3P17-201ENST00000416968 344 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 BX295541.1-201ENST00000417774 250 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AL627311.1-201ENST00000431514 115 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AL353706.1-201ENST00000436728 494 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AC244505.5-201ENST00000443639 207 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 RPL23AP20-201ENST00000447965 421 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 EEF1B2P7-201ENST00000451177 676 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AC012308.1-201ENST00000451232 178 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXA2Q9Y261 RPL36AP48-201ENST00000485521 314 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AC006445.1-201ENST00000491925 405 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXA2Q9Y261 Y_RNA.695-201ENST00000516715 107 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 SNORA70.24-201ENST00000517233 118 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXA2Q9Y261 OR5AL2P-201ENST00000532185 920 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.42□□□□□ -2.02
FOXA2Q9Y261 AC092325.1-201ENST00000566449 554 ntBASIC2.42□□□□□ -2.02
FOXA2Q9Y261 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms