Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 MED13P1-201ENST00000428342 171 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RPL23AP30-201ENST00000432419 501 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AL161651.1-201ENST00000440882 223 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AP000936.2-201ENST00000447151 681 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC098826.2-201ENST00000452011 651 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 SNRPGP9-201ENST00000456025 225 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 SNORD109B-201ENST00000458961 67 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 SNORD109A-201ENST00000459128 67 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RPL23AP45-201ENST00000476406 468 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RPS15AP34-201ENST00000487776 387 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RN7SKP132-201ENST00000516001 208 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 SNORA31.15-201ENST00000516771 132 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AL157871.3-201ENST00000557231 293 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 MIR3682-201ENST00000581338 84 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 NRBF2P5-201ENST00000603087 788 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC068276.1-201ENST00000605793 379 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 MIR15A-201ENST00000607334 83 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCL28Q9NRJ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC004520.1-201ENST00000608362 1413 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC069528.2-201ENST00000624849 1991 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 RNY1P12-201ENST00000364251 105 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 SNORA4.3-201ENST00000365564 137 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 SNORA20.2-201ENST00000383922 131 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 RNU6-1083P-201ENST00000384022 107 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 RNY3P10-201ENST00000384764 102 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 MIR27B-201ENST00000385129 97 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AL139039.1-201ENST00000401900 692 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AL356057.2-201ENST00000403318 432 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 RNU2-25P-201ENST00000411041 191 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 USP9YP6-201ENST00000413550 854 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 OR51A5P-201ENST00000415429 942 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 RPL7P10-201ENST00000417407 739 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC104850.1-201ENST00000435940 476 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 CR769767.1-201ENST00000436337 346 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC104389.3-201ENST00000445629 235 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCL28Q9NRJ3 FABP5P13-201ENST00000452144 328 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 snoU109.1-201ENST00000459339 135 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 Y_RNA.689-201ENST00000516589 107 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 RNU6-572P-201ENST00000516724 80 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC025755.1-201ENST00000521306 278 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC007834.2-201ENST00000536310 343 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AL121821.2-201ENST00000556081 394 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 MTND3P12-201ENST00000559068 328 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 MIR4782-201ENST00000577987 79 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC005771.1-201ENST00000585581 349 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC005261.5-201ENST00000596280 355 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC091152.3-201ENST00000604227 325 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 Z94722.1-201ENST00000604328 474 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AL161734.1-201ENST00000609720 557 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AL359547.2-201ENST00000615810 418 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCL28Q9NRJ3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 TEX21P-201ENST00000447107 1476 ntBASIC2□□□□□ -2.09
CCL28Q9NRJ3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2□□□□□ -2.09
CCL28Q9NRJ3 AC010329.5-201ENST00000623497 2174 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 SNORD46.1-201ENST00000364139 104 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 RNY4P34-201ENST00000364779 95 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 Z98749.2-208ENST00000381646 500 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 SNORA40.3-201ENST00000390964 122 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 RNU2-39P-201ENST00000410604 198 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 RNU6-1025P-201ENST00000410629 104 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 BX682237.1-201ENST00000415016 335 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 ARL5AP4-201ENST00000430731 512 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 MYL8P-204ENST00000431574 518 ntBASIC1.99□□□□□ -2.09
CCL28Q9NRJ3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms