Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 GTF2IP20-201ENST00000431663 360 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC016691.1-201ENST00000441321 413 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AL118520.1-201ENST00000450770 291 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 RPL21P41-201ENST00000459863 264 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC113155.1-201ENST00000511141 769 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 RNU6-1178P-201ENST00000516674 107 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 RNU6-572P-201ENST00000516724 80 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 RN7SKP219-201ENST00000516825 296 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 SNORD19.2-201ENST00000516978 73 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC009902.1-201ENST00000519351 183 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 TPRKBP2-201ENST00000565969 475 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AL591516.1-201ENST00000611326 274 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC091903.1-201ENST00000624322 454 ntBASIC3.1□□□□□ -1.91
BRF2Q9HAW0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.1□□□□□ -1.91
BRF2Q9HAW0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 RNU6-552P-201ENST00000362869 119 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 SNORA62.3-201ENST00000365110 153 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 RNU6-483P-201ENST00000384088 108 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 Y_RNA.554-201ENST00000384672 102 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 SNORA40C-201ENST00000391285 128 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AL356057.2-201ENST00000403318 432 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AL606923.1-201ENST00000406616 190 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 BX323014.1-201ENST00000412876 237 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 RPL21P90-201ENST00000415692 466 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC005300.1-201ENST00000428401 373 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC073415.1-201ENST00000449240 153 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AP003033.1-201ENST00000527244 415 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC034105.4-201ENST00000568304 277 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC025165.5-201ENST00000602802 578 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC024220.1-201ENST00000603675 484 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AL645944.1-201ENST00000603857 493 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AL035413.2-201ENST00000604801 525 ntBASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
BRF2Q9HAW0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
BRF2Q9HAW0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.92
BRF2Q9HAW0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.92
BRF2Q9HAW0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
BRF2Q9HAW0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 MIR490-201ENST00000384865 128 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 RNU6-903P-201ENST00000391270 109 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 MIR1289-1-201ENST00000408836 144 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 MYL8P-204ENST00000431574 518 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 MTND1P4-201ENST00000435196 415 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 SEPT14P3-201ENST00000439401 183 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AL732372.2-207ENST00000445840 183 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 HMGN2P10-201ENST00000448085 265 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 RPS15AP27-201ENST00000449183 343 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 SEPT14P2-201ENST00000453405 183 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 CACYBPP2-201ENST00000453625 678 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 RN7SL601P-201ENST00000471221 293 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 RN7SL293P-201ENST00000481765 281 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 HMGB1P30-201ENST00000492455 606 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC110794.1-201ENST00000505816 425 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 SEM1P1-201ENST00000506694 209 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 SEPT14P4-201ENST00000513445 186 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 RNA5SP401-201ENST00000515920 127 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms