Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 HMGB1P51-201ENST00000605166 638 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 AC016252.1-201ENST00000609721 474 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 MIR8087-201ENST00000612745 78 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 AL136313.1-201ENST00000624804 202 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 AC004808.1-201ENST00000627671 721 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 RNU6-670P-201ENST00000364312 104 ntBASIC1.07□□□□□ -2.24
SCAPERQ9BY12 RNU6-233P-201ENST00000410845 141 ntBASIC1.07□□□□□ -2.24
SCAPERQ9BY12 EDDM3CP-201ENST00000415977 425 ntBASIC1.07□□□□□ -2.24
SCAPERQ9BY12 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.07□□□□□ -2.24
SCAPERQ9BY12 AL358176.2-201ENST00000425769 204 ntBASIC1.07□□□□□ -2.24
SCAPERQ9BY12 AC012497.1-201ENST00000429392 575 ntBASIC1.07□□□□□ -2.24
SCAPERQ9BY12 ZNF965P-201ENST00000432501 817 ntBASIC1.07□□□□□ -2.24
SCAPERQ9BY12 AC004865.1-201ENST00000442276 1003 ntBASIC1.07□□□□□ -2.24
SCAPERQ9BY12 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.07□□□□□ -2.24
SCAPERQ9BY12 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.07□□□□□ -2.24
SCAPERQ9BY12 AC068276.1-201ENST00000605793 379 ntBASIC1.07□□□□□ -2.24
SCAPERQ9BY12 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.07□□□□□ -2.24
SCAPERQ9BY12 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
SCAPERQ9BY12 RNU6-942P-201ENST00000363002 107 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RNA5SP257-201ENST00000363023 116 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RNU6-730P-201ENST00000383954 104 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RNU6-16P-201ENST00000384385 107 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AL392003.1-201ENST00000434394 243 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RPS20P20-201ENST00000460498 340 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RNA5SP121-201ENST00000516537 101 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RNU6-1282P-201ENST00000516735 96 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 SCARNA3-201ENST00000517097 143 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 MIR3126-201ENST00000577443 74 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC055876.5-201ENST00000605667 259 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC006270.3-201ENST00000605967 1036 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC068057.2-201ENST00000624047 895 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 MIR7157-201ENST00000635801 60 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 LINC02211-204ENST00000642024 1070 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 Y_RNA.68-201ENST00000362881 102 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AL139397.2-201ENST00000404529 772 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AL049714.1-201ENST00000466686 347 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RNU6-1095P-201ENST00000516148 108 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RNA5SP165-201ENST00000517142 115 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.06□□□□□ -2.24
SCAPERQ9BY12 MIR3921-201ENST00000577308 85 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 AL021997.1-201ENST00000605757 193 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 U4atac.1-201ENST00000618345 95 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 OR5H6-203ENST00000642105 978 ntBASIC1.06□□□□□ -2.24
SCAPERQ9BY12 RNA5SP499-201ENST00000363982 119 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 HMGN2P39-201ENST00000398005 273 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 AL589655.1-201ENST00000405398 482 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 MTND4LP10-201ENST00000435146 291 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.05□□□□□ -2.24
SCAPERQ9BY12 AC117454.1-201ENST00000491120 168 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.05□□□□□ -2.24
SCAPERQ9BY12 DEFB108D-201ENST00000527787 222 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.05□□□□□ -2.24
SCAPERQ9BY12 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.05□□□□□ -2.24
SCAPERQ9BY12 AL078605.1-201ENST00000603529 500 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 AP003485.1-201ENST00000625093 753 ntBASIC1.05□□□□□ -2.24
SCAPERQ9BY12 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.05□□□□□ -2.24
SCAPERQ9BY12 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SCAPERQ9BY12 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SCAPERQ9BY12 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
SCAPERQ9BY12 RNA5SP212-201ENST00000391223 107 ntBASIC1.04□□□□□ -2.24
SCAPERQ9BY12 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.04□□□□□ -2.24
SCAPERQ9BY12 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAPERQ9BY12 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAPERQ9BY12 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAPERQ9BY12 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.04□□□□□ -2.24
SCAPERQ9BY12 AC013244.2-201ENST00000603396 103 ntBASIC1.04□□□□□ -2.24
SCAPERQ9BY12 MIR6866-201ENST00000638146 69 ntBASIC1.04□□□□□ -2.24
SCAPERQ9BY12 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SCAPERQ9BY12 RNA5SP347-201ENST00000362445 119 ntBASIC1.03□□□□□ -2.24
SCAPERQ9BY12 RNU6-716P-201ENST00000365621 103 ntBASIC1.03□□□□□ -2.24
SCAPERQ9BY12 RNU6-1083P-201ENST00000384022 107 ntBASIC1.03□□□□□ -2.24
SCAPERQ9BY12 MIR1290-201ENST00000408735 78 ntBASIC1.03□□□□□ -2.24
SCAPERQ9BY12 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.03□□□□□ -2.24
SCAPERQ9BY12 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.03□□□□□ -2.24
SCAPERQ9BY12 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.03□□□□□ -2.24
SCAPERQ9BY12 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.03□□□□□ -2.24
SCAPERQ9BY12 AC022616.2-201ENST00000523185 300 ntBASIC1.03□□□□□ -2.24
SCAPERQ9BY12 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.03□□□□□ -2.24
SCAPERQ9BY12 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.03□□□□□ -2.24
SCAPERQ9BY12 AC110792.4-201ENST00000609843 298 ntBASIC1.03□□□□□ -2.24
SCAPERQ9BY12 DUSP12P1-201ENST00000612874 516 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms