Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
FOXC2Q99958 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
FOXC2Q99958 RNA5SP456-201ENST00000364002 114 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 RNU6-920P-201ENST00000410926 92 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXC2Q99958 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXC2Q99958 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
FOXC2Q99958 AL354941.1-201ENST00000438600 464 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 HMGN2P10-201ENST00000448085 265 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC009961.3-201ENST00000449832 765 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 RPL23AP35-201ENST00000451906 501 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC027673.1-201ENST00000456245 405 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.03□□□□□ -2.08
FOXC2Q99958 AC104685.1-201ENST00000502445 371 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC117522.2-201ENST00000510049 657 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 HMGB3P3-201ENST00000510526 400 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 SNORD19.2-201ENST00000516978 73 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.03□□□□□ -2.08
FOXC2Q99958 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXC2Q99958 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.03□□□□□ -2.08
FOXC2Q99958 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.03□□□□□ -2.08
FOXC2Q99958 MIR5571-201ENST00000577998 113 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC024619.4-201ENST00000580924 316 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXC2Q99958 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXC2Q99958 AC008121.1-201ENST00000603244 268 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AP000942.3-201ENST00000603702 160 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC018638.7-201ENST00000605836 1114 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
FOXC2Q99958 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXC2Q99958 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC009159.2-201ENST00000617603 606 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 AC012150.2-201ENST00000621300 544 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.03□□□□□ -2.08
FOXC2Q99958 MIR7157-201ENST00000635801 60 ntBASIC2.03□□□□□ -2.08
FOXC2Q99958 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
FOXC2Q99958 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
FOXC2Q99958 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXC2Q99958 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.02□□□□□ -2.09
FOXC2Q99958 RNU1-138P-201ENST00000384093 164 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 RNU5A-2P-201ENST00000384337 116 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
FOXC2Q99958 AL359634.1-202ENST00000404721 284 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 RPL23AP39-201ENST00000415533 405 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 MORF4L1P6-201ENST00000418771 268 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXC2Q99958 ISCA1P1-201ENST00000426679 387 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXC2Q99958 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.02□□□□□ -2.09
FOXC2Q99958 MTND5P2-201ENST00000442927 1142 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXC2Q99958 OR6C5P-201ENST00000452388 923 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 FABP5P15-201ENST00000453566 214 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
FOXC2Q99958 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.02□□□□□ -2.09
FOXC2Q99958 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXC2Q99958 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.02□□□□□ -2.09
FOXC2Q99958 RNU6-703P-201ENST00000516946 107 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 SCARNA3-201ENST00000517097 143 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AP004247.1-201ENST00000531556 1289 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AC068587.4-201ENST00000533893 186 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AC010186.2-204ENST00000537668 439 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 ELOCP32-201ENST00000548625 324 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.02□□□□□ -2.09
FOXC2Q99958 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
FOXC2Q99958 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXC2Q99958 AC005261.5-201ENST00000596280 355 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AL353778.1-201ENST00000603149 408 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AL355598.1-201ENST00000604169 202 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AL021997.1-201ENST00000605757 193 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AC046143.2-201ENST00000609789 160 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AC103710.1-201ENST00000610003 901 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AL360219.1-201ENST00000610230 366 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 BX664608.1-201ENST00000610519 487 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 AC005332.10-201ENST00000612725 619 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 CU459211.1-201ENST00000635667 749 ntBASIC2.02□□□□□ -2.09
FOXC2Q99958 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
FOXC2Q99958 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
FOXC2Q99958 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
FOXC2Q99958 MTND5P6-201ENST00000422338 1798 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
FOXC2Q99958 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXC2Q99958 SNORA25.6-201ENST00000364121 118 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXC2Q99958 RPL23AP36-201ENST00000413895 458 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXC2Q99958 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXC2Q99958 AC005005.2-201ENST00000420779 380 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXC2Q99958 AC092447.3-201ENST00000426027 686 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AC007560.1-201ENST00000426912 237 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
FOXC2Q99958 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
FOXC2Q99958 GPM6BP2-201ENST00000432046 144 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 LARP1BP3-201ENST00000437229 869 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AC005094.1-201ENST00000440420 368 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 GPM6BP1-201ENST00000446387 144 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 MTATP6P7-201ENST00000453315 681 ntBASIC2.01□□□□□ -2.09
FOXC2Q99958 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXC2Q99958 AL139824.2-201ENST00000458731 1095 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms