Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU5E-1-201ENST00000362477 120 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 SNORD62.1-201ENST00000362541 86 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.22□□□□□ -2.05
RAB40BQ12829 MIR23A-201ENST00000385245 73 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 MIR147B-201ENST00000390185 80 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 U3.37-201ENST00000408528 213 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.22□□□□□ -2.05
RAB40BQ12829 USP9YP6-201ENST00000413550 854 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.22□□□□□ -2.05
RAB40BQ12829 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.22□□□□□ -2.05
RAB40BQ12829 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.22□□□□□ -2.05
RAB40BQ12829 AL591704.1-201ENST00000432574 275 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC107083.1-201ENST00000439643 279 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC104389.3-201ENST00000445629 235 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 FABP5P13-201ENST00000452144 328 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC092001.1-201ENST00000453012 261 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.22□□□□□ -2.05
RAB40BQ12829 AC097462.2-201ENST00000504623 481 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 Y_RNA.672-201ENST00000516289 104 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 Y_RNA.689-201ENST00000516589 107 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.22□□□□□ -2.05
RAB40BQ12829 AC025755.1-201ENST00000521306 278 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.22□□□□□ -2.05
RAB40BQ12829 MIR4446-201ENST00000578505 67 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 MIR3915-201ENST00000578518 97 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC174048.1-201ENST00000603389 144 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC091152.3-201ENST00000604227 325 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AL603755.1-201ENST00000619504 163 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC135776.4-201ENST00000624300 1904 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RAB40BQ12829 AC080100.1-201ENST00000624239 5356 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RAB40BQ12829 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.21□□□□□ -2.06
RAB40BQ12829 SNORA4.3-201ENST00000365564 137 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 RNU6-39P-201ENST00000384344 107 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 RNU6-19P-201ENST00000384718 107 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 RNU6-1025P-201ENST00000410629 104 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AF274854.1-201ENST00000413236 615 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 OR51A5P-201ENST00000415429 942 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.21□□□□□ -2.06
RAB40BQ12829 PTGES3P4-201ENST00000426243 356 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC007560.1-201ENST00000426912 237 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.21□□□□□ -2.06
RAB40BQ12829 RPL23AP30-201ENST00000432419 501 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AL135938.1-201ENST00000443141 297 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 TAF9P1-201ENST00000445421 515 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AL513328.1-201ENST00000446460 224 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 TAF9P2-201ENST00000454958 515 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC090096.1-201ENST00000489168 390 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC109927.2-201ENST00000506416 303 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC096725.1-201ENST00000514266 313 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.21□□□□□ -2.06
RAB40BQ12829 RNU6-581P-201ENST00000516214 105 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 RNA5SP367-201ENST00000516557 118 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 SNORA31.19-201ENST00000517079 126 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC079600.2-201ENST00000550076 130 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC145350.1-201ENST00000567426 208 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC109446.2-201ENST00000567872 497 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 MIR3199-1-201ENST00000582434 88 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC009977.1-201ENST00000586015 570 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 MIR15A-201ENST00000607334 83 ntBASIC2.21□□□□□ -2.06
RAB40BQ12829 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.21□□□□□ -2.06
RAB40BQ12829 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RAB40BQ12829 Y_RNA.169-201ENST00000363745 96 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 Z98749.2-208ENST00000381646 500 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 SNORA80E-201ENST00000384744 137 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 RPL23AP32-201ENST00000395315 459 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 RNU2-8P-201ENST00000410727 190 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 RPS24P1-201ENST00000438550 371 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.2□□□□□ -2.06
RAB40BQ12829 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.2□□□□□ -2.06
RAB40BQ12829 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.2□□□□□ -2.06
RAB40BQ12829 SNRPFP4-201ENST00000456366 242 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 AC023141.11-201ENST00000508864 202 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.2□□□□□ -2.06
RAB40BQ12829 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.2□□□□□ -2.06
RAB40BQ12829 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.2□□□□□ -2.06
RAB40BQ12829 OR5B19P-201ENST00000531766 928 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 AL157871.3-201ENST00000557231 293 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.2□□□□□ -2.06
RAB40BQ12829 ELOCP29-201ENST00000588193 334 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 BNIP3P8-201ENST00000597863 560 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 ATP1B3P1-201ENST00000605365 821 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 MIR7106-201ENST00000612419 65 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 CU459211.1-201ENST00000635667 749 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RAB40BQ12829 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.2□□□□□ -2.06
RAB40BQ12829 MTND4P27-201ENST00000450813 1354 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RAB40BQ12829 TEX21P-201ENST00000447107 1476 ntBASIC2.2□□□□□ -2.06
RAB40BQ12829 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 Y_RNA.33-201ENST00000362591 102 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 MIR218-1-201ENST00000384999 110 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 RPL17P50-201ENST00000396131 546 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 AL360182.1-201ENST00000397433 468 ntBASIC2.19□□□□□ -2.06
RAB40BQ12829 AL109913.1-201ENST00000421173 514 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms