Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 DPPA3P3-201ENST00000603842 430 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AC107214.2-201ENST00000608204 634 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AC004908.2-201ENST00000609090 574 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AL355472.4-201ENST00000610233 626 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AC013562.2-201ENST00000611632 603 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL12P48061 MIR6895-201ENST00000613497 78 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AC021755.4-201ENST00000616620 456 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AC091965.5-201ENST00000624785 342 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 AL136313.1-201ENST00000624804 202 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CXCL12P48061 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CXCL12P48061 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.98□□□□□ -2.09
CXCL12P48061 MIR6073-201ENST00000352083 89 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 Y_RNA.18-201ENST00000362461 102 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 RNA5SP190-201ENST00000365222 118 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AC078974.1-201ENST00000411597 223 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 BTF3L4P3-201ENST00000418879 476 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 USP9YP26-201ENST00000421008 661 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL12P48061 USP12PX-201ENST00000432383 1057 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AC010153.1-201ENST00000432862 727 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL12P48061 MTCYBP3-201ENST00000445588 1137 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL12P48061 RNU7-59P-201ENST00000459101 61 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
CXCL12P48061 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL12P48061 HMGB3P3-201ENST00000510526 400 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.97□□□□□ -2.09
CXCL12P48061 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL12P48061 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 RNU6-64P-201ENST00000517119 105 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 RNA5SP402-201ENST00000517148 110 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 RNA5SP291-201ENST00000517222 105 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.97□□□□□ -2.09
CXCL12P48061 MTND1P24-201ENST00000552175 861 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AL391261.3-201ENST00000557194 520 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 MIR5694-201ENST00000581190 76 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 MIR4307-201ENST00000582802 84 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL12P48061 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL12P48061 AC068790.3-201ENST00000602988 553 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AL161729.4-201ENST00000604650 476 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 AC068880.5-201ENST00000624331 290 ntBASIC1.97□□□□□ -2.09
CXCL12P48061 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CXCL12P48061 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CXCL12P48061 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL12P48061 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CXCL12P48061 RNU6-457P-201ENST00000363999 107 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 SET-203ENST00000372688 801 ntTSL 2 BASIC1.96□□□□□ -2.1
CXCL12P48061 AL139397.2-201ENST00000404529 772 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AC098592.1-201ENST00000419352 333 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 MTCO3P30-201ENST00000426425 670 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 ZNF863P-201ENST00000426746 417 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL12P48061 AC005094.1-201ENST00000440420 368 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AC009296.1-201ENST00000443146 155 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AC020550.1-201ENST00000447385 163 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL12P48061 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL12P48061 RNU7-23P-201ENST00000459465 62 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 SUMO2P6-201ENST00000505273 288 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CXCL12P48061 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.96□□□□□ -2.1
CXCL12P48061 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.96□□□□□ -2.1
CXCL12P48061 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL12P48061 MTATP6P15-201ENST00000527233 835 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AP003461.1-201ENST00000528866 78 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.96□□□□□ -2.1
CXCL12P48061 ELOCP32-201ENST00000548625 324 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL12P48061 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.96□□□□□ -2.1
CXCL12P48061 MIR4293-201ENST00000584305 78 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 HMGN2P15-201ENST00000585707 270 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AP000811.1-201ENST00000603803 651 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 MTND4LP5-201ENST00000605152 292 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 FTX_3.1-201ENST00000610451 147 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AC004852.3-201ENST00000614131 326 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL12P48061 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 AC079395.3-201ENST00000615161 484 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.96□□□□□ -2.1
CXCL12P48061 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.96□□□□□ -2.1
CXCL12P48061 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CXCL12P48061 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
CXCL12P48061 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL12P48061 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.95□□□□□ -2.1
CXCL12P48061 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL12P48061 MIRLET7G-201ENST00000362280 84 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 Y_RNA.97-201ENST00000363094 102 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 RNA5SP354-201ENST00000391247 136 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL359634.1-202ENST00000404721 284 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL12P48061 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL12P48061 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL12P48061 BTF3P4-201ENST00000418852 495 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 XKRYP1-201ENST00000423438 492 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms