Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
RFC1P35251 RPL39P36-201ENST00000490784 156 ntBASIC3.31□□□□□ -1.88
RFC1P35251 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC1P35251 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.31□□□□□ -1.88
RFC1P35251 AC104806.1-201ENST00000508720 308 ntBASIC3.31□□□□□ -1.88
RFC1P35251 AC074250.1-201ENST00000511117 192 ntBASIC3.31□□□□□ -1.88
RFC1P35251 RNU6-123P-201ENST00000516163 102 ntBASIC3.31□□□□□ -1.88
RFC1P35251 RNU6-927P-201ENST00000516199 100 ntBASIC3.31□□□□□ -1.88
RFC1P35251 RNU6-1256P-201ENST00000516539 103 ntBASIC3.31□□□□□ -1.88
RFC1P35251 SNORA20.3-201ENST00000516880 132 ntBASIC3.31□□□□□ -1.88
RFC1P35251 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.31□□□□□ -1.88
RFC1P35251 AF235103.2-201ENST00000525753 346 ntBASIC3.31□□□□□ -1.88
RFC1P35251 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFC1P35251 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RFC1P35251 DNAJC8P1-201ENST00000554535 372 ntBASIC3.31□□□□□ -1.88
RFC1P35251 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.31□□□□□ -1.88
RFC1P35251 MIR4424-201ENST00000585257 86 ntBASIC3.31□□□□□ -1.88
RFC1P35251 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
RFC1P35251 AC130324.3-201ENST00000614165 542 ntBASIC3.31□□□□□ -1.88
RFC1P35251 MIR7112-201ENST00000616126 65 ntBASIC3.31□□□□□ -1.88
RFC1P35251 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.31□□□□□ -1.88
RFC1P35251 AC027309.3-201ENST00000623419 351 ntBASIC3.31□□□□□ -1.88
RFC1P35251 MTND5P42-201ENST00000637720 498 ntBASIC3.31□□□□□ -1.88
RFC1P35251 AC103710.2-202ENST00000641454 2853 ntBASIC3.31□□□□□ -1.88
RFC1P35251 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.31□□□□□ -1.88
RFC1P35251 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
RFC1P35251 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.31□□□□□ -1.88
RFC1P35251 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.3□□□□□ -1.88
RFC1P35251 TPTE2P4-201ENST00000258589 1605 ntBASIC3.3□□□□□ -1.88
RFC1P35251 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RFC1P35251 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RFC1P35251 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RFC1P35251 RNU6-288P-201ENST00000363690 104 ntBASIC3.3□□□□□ -1.88
RFC1P35251 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
RFC1P35251 RNU2-29P-201ENST00000410423 189 ntBASIC3.3□□□□□ -1.88
RFC1P35251 RNA5SP120-201ENST00000410900 112 ntBASIC3.3□□□□□ -1.88
RFC1P35251 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
RFC1P35251 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC1P35251 AC012498.1-201ENST00000424037 437 ntBASIC3.3□□□□□ -1.88
RFC1P35251 RPL7P46-201ENST00000425129 740 ntBASIC3.3□□□□□ -1.88
RFC1P35251 RPL7L1P10-201ENST00000427790 463 ntBASIC3.3□□□□□ -1.88
RFC1P35251 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
RFC1P35251 CALM1P1-201ENST00000442082 433 ntBASIC3.3□□□□□ -1.88
RFC1P35251 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC1P35251 AL031183.1-201ENST00000457667 207 ntBASIC3.3□□□□□ -1.88
RFC1P35251 RNU7-180P-201ENST00000459240 63 ntBASIC3.3□□□□□ -1.88
RFC1P35251 MTCYBP18-201ENST00000501056 747 ntBASIC3.3□□□□□ -1.88
RFC1P35251 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC1P35251 AC006445.2-201ENST00000510061 472 ntBASIC3.3□□□□□ -1.88
RFC1P35251 SNORD60.2-201ENST00000516883 86 ntBASIC3.3□□□□□ -1.88
RFC1P35251 RNA5SP471-201ENST00000516971 106 ntBASIC3.3□□□□□ -1.88
RFC1P35251 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.3□□□□□ -1.88
RFC1P35251 PSMA2P1-201ENST00000526365 646 ntBASIC3.3□□□□□ -1.88
RFC1P35251 AL121579.1-201ENST00000555129 305 ntBASIC3.3□□□□□ -1.88
RFC1P35251 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.3□□□□□ -1.88
RFC1P35251 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.3□□□□□ -1.88
RFC1P35251 AC174048.1-201ENST00000603389 144 ntBASIC3.3□□□□□ -1.88
RFC1P35251 AC013553.2-201ENST00000604244 589 ntBASIC3.3□□□□□ -1.88
RFC1P35251 HSPE1P7-201ENST00000604681 321 ntBASIC3.3□□□□□ -1.88
RFC1P35251 U6.114-201ENST00000636407 96 ntBASIC3.3□□□□□ -1.88
RFC1P35251 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFC1P35251 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.3□□□□□ -1.88
RFC1P35251 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFC1P35251 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFC1P35251 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.29□□□□□ -1.88
RFC1P35251 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFC1P35251 RNU6-799P-201ENST00000363567 107 ntBASIC3.29□□□□□ -1.88
RFC1P35251 RNU6-867P-201ENST00000364956 107 ntBASIC3.29□□□□□ -1.88
RFC1P35251 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC1P35251 MIR514A2-201ENST00000385131 88 ntBASIC3.29□□□□□ -1.88
RFC1P35251 MIR514A3-201ENST00000385132 88 ntBASIC3.29□□□□□ -1.88
RFC1P35251 RNU6-550P-201ENST00000391057 101 ntBASIC3.29□□□□□ -1.88
RFC1P35251 RNU6-817P-201ENST00000391083 104 ntBASIC3.29□□□□□ -1.88
RFC1P35251 RNA5SP252-201ENST00000391131 119 ntBASIC3.29□□□□□ -1.88
RFC1P35251 RNU6-876P-201ENST00000391295 104 ntBASIC3.29□□□□□ -1.88
RFC1P35251 AL356776.1-201ENST00000406574 447 ntBASIC3.29□□□□□ -1.88
RFC1P35251 RNU6-193P-201ENST00000410977 107 ntBASIC3.29□□□□□ -1.88
RFC1P35251 AC022028.1-201ENST00000412054 408 ntBASIC3.29□□□□□ -1.88
RFC1P35251 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC1P35251 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.29□□□□□ -1.88
RFC1P35251 SRIP2-201ENST00000428470 166 ntBASIC3.29□□□□□ -1.88
RFC1P35251 AL356867.1-201ENST00000429623 299 ntBASIC3.29□□□□□ -1.88
RFC1P35251 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC1P35251 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.29□□□□□ -1.88
RFC1P35251 MTND4P25-201ENST00000441039 533 ntBASIC3.29□□□□□ -1.88
RFC1P35251 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
RFC1P35251 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC1P35251 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.29□□□□□ -1.88
RFC1P35251 FABP5P13-201ENST00000452144 328 ntBASIC3.29□□□□□ -1.88
RFC1P35251 MTND3P16-201ENST00000452205 344 ntBASIC3.29□□□□□ -1.88
RFC1P35251 RPL7P49-201ENST00000471402 708 ntBASIC3.29□□□□□ -1.88
RFC1P35251 AC109925.1-201ENST00000478069 331 ntBASIC3.29□□□□□ -1.88
RFC1P35251 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC1P35251 TTC39CP1-201ENST00000512513 755 ntBASIC3.29□□□□□ -1.88
RFC1P35251 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.29□□□□□ -1.88
RFC1P35251 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFC1P35251 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.29□□□□□ -1.88
RFC1P35251 MIR5680-201ENST00000577577 84 ntBASIC3.29□□□□□ -1.88
RFC1P35251 MIR5583-1-201ENST00000580941 59 ntBASIC3.29□□□□□ -1.88
RFC1P35251 MIR3944-201ENST00000581277 108 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms