Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MTND4P6-201ENST00000438297 472 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 FGF7P5-201ENST00000441829 291 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.06□□□□□ -2.08
NPHP4O75161 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.06□□□□□ -2.08
NPHP4O75161 HMGB3P3-201ENST00000510526 400 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.06□□□□□ -2.08
NPHP4O75161 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.06□□□□□ -2.08
NPHP4O75161 AP003497.1-201ENST00000528472 562 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.06□□□□□ -2.08
NPHP4O75161 LRRC6P1-201ENST00000532188 885 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 AL512347.1-201ENST00000566420 503 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 AC126118.1-201ENST00000607744 628 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 AC079395.3-201ENST00000615161 484 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 AP003476.1-201ENST00000623984 516 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 MIR7515-201ENST00000637837 67 ntBASIC2.06□□□□□ -2.08
NPHP4O75161 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.06□□□□□ -2.08
NPHP4O75161 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
NPHP4O75161 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.05□□□□□ -2.08
NPHP4O75161 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NPHP4O75161 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NPHP4O75161 RNU6-97P-201ENST00000363387 104 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 SNORA23-201ENST00000365128 182 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 RNU6-637P-201ENST00000384050 107 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 Y_RNA.472-201ENST00000384322 102 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.05□□□□□ -2.08
NPHP4O75161 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.05□□□□□ -2.08
NPHP4O75161 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.05□□□□□ -2.08
NPHP4O75161 MTND2P29-201ENST00000438595 412 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 MTND5P14-201ENST00000441481 1267 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.05□□□□□ -2.08
NPHP4O75161 MTND1P36-201ENST00000522384 936 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NPHP4O75161 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.05□□□□□ -2.08
NPHP4O75161 TRAV28-201ENST00000557548 323 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 ANP32BP3-201ENST00000559213 706 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 AC087465.1-201ENST00000560574 245 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 MIR3117-201ENST00000584034 78 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.05□□□□□ -2.08
NPHP4O75161 BNIP3P27-201ENST00000599991 412 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 AL139344.1-201ENST00000605228 195 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.05□□□□□ -2.08
NPHP4O75161 AL357080.1-201ENST00000617394 239 ntBASIC2.05□□□□□ -2.08
NPHP4O75161 AL354685.2-201ENST00000448218 1447 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NPHP4O75161 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
NPHP4O75161 RNU6-289P-201ENST00000364093 107 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 Y_RNA.374-201ENST00000365606 101 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 RNU6-217P-201ENST00000384164 104 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 RNU6-1072P-201ENST00000384703 107 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 RNU6-443P-201ENST00000384780 107 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.04□□□□□ -2.08
NPHP4O75161 AL445687.1-201ENST00000439946 251 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 Z82210.1-201ENST00000440037 231 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 KATNBL1P3-201ENST00000443475 909 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AC007395.1-201ENST00000451333 677 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.04□□□□□ -2.08
NPHP4O75161 RPS20P20-201ENST00000460498 340 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 MRPS17P3-201ENST00000465453 385 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.04□□□□□ -2.08
NPHP4O75161 RPL23AP41-201ENST00000484754 458 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.04□□□□□ -2.08
NPHP4O75161 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.04□□□□□ -2.08
NPHP4O75161 NRON-201ENST00000517270 370 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.04□□□□□ -2.08
NPHP4O75161 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.04□□□□□ -2.08
NPHP4O75161 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.04□□□□□ -2.08
NPHP4O75161 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.04□□□□□ -2.08
NPHP4O75161 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 MIR3660-201ENST00000584845 100 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AL606834.3-201ENST00000602615 496 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 RNU6-1192P-201ENST00000612197 107 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 RNU6-489P-201ENST00000618289 107 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AC008121.3-201ENST00000618726 433 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 MIR6788-201ENST00000618842 66 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AC068057.2-201ENST00000624047 895 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AL159972.1-201ENST00000625150 448 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AP003399.1-201ENST00000637534 361 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NPHP4O75161 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.04□□□□□ -2.08
NPHP4O75161 AP000560.1-201ENST00000624150 1937 ntBASIC2.04□□□□□ -2.08
NPHP4O75161 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.04□□□□□ -2.08
NPHP4O75161 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.03□□□□□ -2.08
NPHP4O75161 RNU6-140P-201ENST00000384566 108 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 RNU2-49P-201ENST00000410666 184 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.03□□□□□ -2.08
NPHP4O75161 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.03□□□□□ -2.08
NPHP4O75161 UBE2V1P13-201ENST00000436983 439 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.03□□□□□ -2.08
NPHP4O75161 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.03□□□□□ -2.08
NPHP4O75161 ARPC3P5-201ENST00000448802 534 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 ATG12P2-201ENST00000456830 416 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 AC113155.1-201ENST00000511141 769 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 RNU6-276P-201ENST00000516114 96 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 RNU6-467P-201ENST00000517027 110 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.03□□□□□ -2.08
NPHP4O75161 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.03□□□□□ -2.08
NPHP4O75161 MIR4658-201ENST00000584344 65 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 FAM106DP-201ENST00000586416 501 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 AC005498.1-201ENST00000592125 465 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms