Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 UBE2FP1-201ENST00000416536 447 ntBASIC1.83□□□□□ -2.12
SHOX2O60902 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.83□□□□□ -2.12
SHOX2O60902 RPL30P4-201ENST00000429309 333 ntBASIC1.83□□□□□ -2.12
SHOX2O60902 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.83□□□□□ -2.12
SHOX2O60902 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.83□□□□□ -2.12
SHOX2O60902 FABP5P14-201ENST00000437273 393 ntBASIC1.83□□□□□ -2.12
SHOX2O60902 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.83□□□□□ -2.12
SHOX2O60902 AC055731.1-201ENST00000474387 401 ntBASIC1.83□□□□□ -2.12
SHOX2O60902 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.83□□□□□ -2.12
SHOX2O60902 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.83□□□□□ -2.12
SHOX2O60902 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SHOX2O60902 RNA5SP112-201ENST00000515937 99 ntBASIC1.83□□□□□ -2.12
SHOX2O60902 AC005832.3-201ENST00000537929 631 ntBASIC1.83□□□□□ -2.12
SHOX2O60902 AC026464.5-201ENST00000562497 722 ntBASIC1.83□□□□□ -2.12
SHOX2O60902 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.83□□□□□ -2.12
SHOX2O60902 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.83□□□□□ -2.12
SHOX2O60902 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.83□□□□□ -2.12
SHOX2O60902 AC084824.5-201ENST00000612009 413 ntBASIC1.83□□□□□ -2.12
SHOX2O60902 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.83□□□□□ -2.12
SHOX2O60902 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SHOX2O60902 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.82□□□□□ -2.12
SHOX2O60902 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SHOX2O60902 SNORA63.3-201ENST00000362682 132 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU1-17P-201ENST00000363022 152 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-1-201ENST00000383898 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-42P-201ENST00000384165 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-36P-201ENST00000384172 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-4P-201ENST00000384205 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-5P-201ENST00000384238 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-3P-201ENST00000384314 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-2-201ENST00000384627 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-9-201ENST00000384776 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-33P-201ENST00000384793 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 RNU2-68P-201ENST00000410878 191 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.82□□□□□ -2.12
SHOX2O60902 SNORD56-201ENST00000413522 71 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC093106.2-201ENST00000428212 385 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC108667.1-201ENST00000428618 249 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.82□□□□□ -2.12
SHOX2O60902 AC004383.1-201ENST00000438135 289 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC092473.1-201ENST00000441098 221 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.82□□□□□ -2.12
SHOX2O60902 MTCO2P25-201ENST00000447065 681 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 HMGN2P10-201ENST00000448085 265 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 MTND1P31-201ENST00000449206 961 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.82□□□□□ -2.12
SHOX2O60902 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.82□□□□□ -2.12
SHOX2O60902 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.82□□□□□ -2.12
SHOX2O60902 AC104090.1-201ENST00000506341 1171 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC024589.1-201ENST00000512207 263 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 TRMT112P2-201ENST00000512910 132 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 SNORA31.25-201ENST00000517242 134 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.82□□□□□ -2.12
SHOX2O60902 DEFB131D-201ENST00000526803 184 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC118273.2-201ENST00000532092 465 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC021739.1-201ENST00000559631 174 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.82□□□□□ -2.12
SHOX2O60902 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.82□□□□□ -2.12
SHOX2O60902 RNU6-6P-201ENST00000606623 107 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AC011939.3-201ENST00000613686 466 ntBASIC1.82□□□□□ -2.12
SHOX2O60902 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHOX2O60902 MIR378A-201ENST00000362177 66 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 Y_RNA.110-201ENST00000363220 99 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 RNU1-148P-201ENST00000384472 162 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 RNU2-72P-201ENST00000411175 163 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.81□□□□□ -2.12
SHOX2O60902 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.81□□□□□ -2.12
SHOX2O60902 RPS24P7-201ENST00000416921 246 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.81□□□□□ -2.12
SHOX2O60902 USP9YP26-201ENST00000421008 661 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.81□□□□□ -2.12
SHOX2O60902 SNRPEP7-201ENST00000438350 220 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.81□□□□□ -2.12
SHOX2O60902 AC020550.1-201ENST00000447385 163 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.81□□□□□ -2.12
SHOX2O60902 RPL37P6-201ENST00000460682 294 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 RPL7P18-201ENST00000478965 734 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AL163540.1-201ENST00000485382 386 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.81□□□□□ -2.12
SHOX2O60902 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.81□□□□□ -2.12
SHOX2O60902 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.81□□□□□ -2.12
SHOX2O60902 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.81□□□□□ -2.12
SHOX2O60902 MRPS33P3-201ENST00000513456 322 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.81□□□□□ -2.12
SHOX2O60902 MTCO2P15-201ENST00000532655 656 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AL132657.2-201ENST00000564417 358 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC104072.1-201ENST00000568817 668 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC068276.1-201ENST00000605793 379 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.81□□□□□ -2.12
SHOX2O60902 AC103710.1-201ENST00000610003 901 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC124016.2-201ENST00000610058 665 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 DUSP12P1-201ENST00000612874 516 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC104763.3-201ENST00000613765 618 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC024581.2-201ENST00000619986 252 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 AC095038.3-201ENST00000634439 195 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms