Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL157871.3-201ENST00000557231 293 ntBASIC2.88□□□□□ -1.95
SSX4O60224 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.88□□□□□ -1.95
SSX4O60224 MIR1273C-201ENST00000578669 77 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
SSX4O60224 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.88□□□□□ -1.95
SSX4O60224 AC008752.3-201ENST00000588113 712 ntBASIC2.88□□□□□ -1.95
SSX4O60224 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX4O60224 AC068790.6-201ENST00000602558 258 ntBASIC2.88□□□□□ -1.95
SSX4O60224 DEFB131E-202ENST00000602581 683 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AL627309.6-201ENST00000606857 840 ntBASIC2.88□□□□□ -1.95
SSX4O60224 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.88□□□□□ -1.95
SSX4O60224 AC084782.3-201ENST00000612282 578 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AL162274.2-201ENST00000614406 332 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AL359880.1-201ENST00000621879 266 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC024940.5-201ENST00000622889 474 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AP003122.6-201ENST00000623831 495 ntBASIC2.88□□□□□ -1.95
SSX4O60224 MIR6733-201ENST00000635723 61 ntBASIC2.88□□□□□ -1.95
SSX4O60224 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.88□□□□□ -1.95
SSX4O60224 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.88□□□□□ -1.95
SSX4O60224 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX4O60224 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX4O60224 AL353743.1-202ENST00000431724 1695 ntBASIC2.88□□□□□ -1.95
SSX4O60224 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX4O60224 AC093010.3-201ENST00000570269 15214 ntBASIC2.87□□□□□ -1.95
SSX4O60224 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.87□□□□□ -1.95
SSX4O60224 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSX4O60224 SNORA51.4-201ENST00000364993 124 ntBASIC2.87□□□□□ -1.95
SSX4O60224 RNU1-73P-201ENST00000383971 164 ntBASIC2.87□□□□□ -1.95
SSX4O60224 RNU6-116P-201ENST00000384042 109 ntBASIC2.87□□□□□ -1.95
SSX4O60224 Y_RNA.516-201ENST00000384541 124 ntBASIC2.87□□□□□ -1.95
SSX4O60224 RNU6-1158P-201ENST00000391167 107 ntBASIC2.87□□□□□ -1.95
SSX4O60224 AL139039.1-201ENST00000401900 692 ntBASIC2.87□□□□□ -1.95
SSX4O60224 USP9YP6-201ENST00000413550 854 ntBASIC2.87□□□□□ -1.95
SSX4O60224 OR6C66P-201ENST00000414917 930 ntBASIC2.87□□□□□ -1.95
SSX4O60224 RPL32P35-201ENST00000415214 394 ntBASIC2.87□□□□□ -1.95
SSX4O60224 AL031779.1-201ENST00000415663 330 ntBASIC2.87□□□□□ -1.95
SSX4O60224 MTCO3P30-201ENST00000426425 670 ntBASIC2.87□□□□□ -1.95
SSX4O60224 CALM2P2-201ENST00000428512 440 ntBASIC2.87□□□□□ -1.95
SSX4O60224 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX4O60224 AL596276.1-201ENST00000434465 418 ntBASIC2.87□□□□□ -1.95
SSX4O60224 MTND1P34-201ENST00000438556 671 ntBASIC2.87□□□□□ -1.95
SSX4O60224 MTND1P18-201ENST00000448191 573 ntBASIC2.87□□□□□ -1.95
SSX4O60224 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX4O60224 AC092798.1-201ENST00000458542 409 ntBASIC2.87□□□□□ -1.95
SSX4O60224 SRRM1P2-201ENST00000464531 1192 ntBASIC2.87□□□□□ -1.95
SSX4O60224 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.87□□□□□ -1.95
SSX4O60224 AC092436.1-201ENST00000506450 503 ntBASIC2.87□□□□□ -1.95
SSX4O60224 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.87□□□□□ -1.95
SSX4O60224 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.87□□□□□ -1.95
SSX4O60224 AC025755.1-201ENST00000521306 278 ntBASIC2.87□□□□□ -1.95
SSX4O60224 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX4O60224 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX4O60224 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.87□□□□□ -1.95
SSX4O60224 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.87□□□□□ -1.95
SSX4O60224 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.87□□□□□ -1.95
SSX4O60224 AC012119.1-201ENST00000603184 222 ntBASIC2.87□□□□□ -1.95
SSX4O60224 AF250324.2-201ENST00000608299 610 ntBASIC2.87□□□□□ -1.95
SSX4O60224 AP001596.2-201ENST00000608410 312 ntBASIC2.87□□□□□ -1.95
SSX4O60224 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.87□□□□□ -1.95
SSX4O60224 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SSX4O60224 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSX4O60224 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSX4O60224 AC017071.1-201ENST00000564407 2204 ntBASIC2.87□□□□□ -1.95
SSX4O60224 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX4O60224 HSPA8P4-201ENST00000511877 1920 ntBASIC2.86□□□□□ -1.95
SSX4O60224 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
SSX4O60224 NACAP2-201ENST00000318548 624 ntBASIC2.86□□□□□ -1.95
SSX4O60224 RNU6-799P-201ENST00000363567 107 ntBASIC2.86□□□□□ -1.95
SSX4O60224 RNU6-550P-201ENST00000391057 101 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX4O60224 RPL5P18-201ENST00000406671 891 ntBASIC2.86□□□□□ -1.95
SSX4O60224 RNU6-1025P-201ENST00000410629 104 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.86□□□□□ -1.95
SSX4O60224 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX4O60224 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX4O60224 AL118520.1-201ENST00000450770 291 ntBASIC2.86□□□□□ -1.95
SSX4O60224 RNU7-63P-201ENST00000459054 62 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AP001486.1-201ENST00000463339 476 ntBASIC2.86□□□□□ -1.95
SSX4O60224 RPL36AP51-201ENST00000487216 318 ntBASIC2.86□□□□□ -1.95
SSX4O60224 RPS27AP10-201ENST00000496103 208 ntBASIC2.86□□□□□ -1.95
SSX4O60224 EIF4EP3-201ENST00000498782 656 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC110794.1-201ENST00000505816 425 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC114786.4-201ENST00000508771 728 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC105417.1-201ENST00000514691 285 ntBASIC2.86□□□□□ -1.95
SSX4O60224 RNU6-314P-201ENST00000516574 104 ntBASIC2.86□□□□□ -1.95
SSX4O60224 RNU6-703P-201ENST00000516946 107 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.86□□□□□ -1.95
SSX4O60224 AC005476.1-201ENST00000554427 397 ntBASIC2.86□□□□□ -1.95
SSX4O60224 DNAJC8P1-201ENST00000554535 372 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC010653.1-201ENST00000571108 881 ntBASIC2.86□□□□□ -1.95
SSX4O60224 MIR4703-201ENST00000577728 79 ntBASIC2.86□□□□□ -1.95
SSX4O60224 MTATP6P3-201ENST00000581686 676 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX4O60224 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX4O60224 AC007938.3-201ENST00000604965 623 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC008945.2-201ENST00000606056 604 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AP001330.5-201ENST00000607176 411 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC092954.2-201ENST00000609103 430 ntBASIC2.86□□□□□ -1.95
SSX4O60224 AC135507.2-201ENST00000612443 309 ntBASIC2.86□□□□□ -1.95
SSX4O60224 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms