Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.55□□□□□ -2.32
CACNA1AO00555 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.55□□□□□ -2.32
CACNA1AO00555 RNU6-1073P-201ENST00000517182 106 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.55□□□□□ -2.32
CACNA1AO00555 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AC106052.1-201ENST00000608029 497 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AC091932.3-201ENST00000624223 323 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 RNU6-1331P-201ENST00000363658 106 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 MIR32-201ENST00000384965 70 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 MIR320B1-201ENST00000390209 79 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
CACNA1AO00555 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CACNA1AO00555 MRPL35P1-201ENST00000404272 572 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 RPS26P42-201ENST00000413485 326 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 MTCO2P32-201ENST00000514865 403 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AC109635.4-202ENST00000531666 412 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AC026371.1-201ENST00000551867 419 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 LINC00933-203ENST00000559812 219 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AC106900.2-201ENST00000604994 317 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.55□□□□□ -2.32
CACNA1AO00555 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.55□□□□□ -2.32
CACNA1AO00555 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.54□□□□□ -2.32
CACNA1AO00555 MT-TP-201ENST00000387461 68 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 XKRYP1-201ENST00000423438 492 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 XKRYP2-201ENST00000432915 492 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 RPL37P21-201ENST00000435890 276 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 IGKV1-22-201ENST00000524313 326 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.54□□□□□ -2.32
CACNA1AO00555 AL133507.1-201ENST00000605269 557 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 AL355802.3-201ENST00000607571 545 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 FRG1HP-204ENST00000617940 757 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 AC007792.1-201ENST00000623023 402 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 CIR1P3-201ENST00000405137 479 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 AL133384.1-201ENST00000412744 351 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 PDCL2P1-201ENST00000419302 352 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 RPL21P66-201ENST00000426566 466 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.54□□□□□ -2.32
CACNA1AO00555 RPL30P11-201ENST00000495304 339 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 AC025768.1-201ENST00000510057 267 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.54□□□□□ -2.32
CACNA1AO00555 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.54□□□□□ -2.32
CACNA1AO00555 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.54□□□□□ -2.32
CACNA1AO00555 AC012676.2-201ENST00000619258 186 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 AC007275.1-201ENST00000621243 671 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 AC073592.7-201ENST00000623659 507 ntBASIC0.54□□□□□ -2.32
CACNA1AO00555 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CACNA1AO00555 MIR496-201ENST00000385226 102 ntBASIC0.53□□□□□ -2.32
CACNA1AO00555 HMGB1P38-201ENST00000490557 577 ntBASIC0.53□□□□□ -2.32
CACNA1AO00555 FAM206BP-201ENST00000510179 541 ntBASIC0.53□□□□□ -2.32
CACNA1AO00555 RNA5SP471-201ENST00000516971 106 ntBASIC0.53□□□□□ -2.32
CACNA1AO00555 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.53□□□□□ -2.32
CACNA1AO00555 AL136363.1-201ENST00000605349 337 ntBASIC0.53□□□□□ -2.32
CACNA1AO00555 AC025594.3-201ENST00000613068 790 ntBASIC0.53□□□□□ -2.32
CACNA1AO00555 AC138627.2-201ENST00000624202 601 ntBASIC0.53□□□□□ -2.32
CACNA1AO00555 MIR4496-201ENST00000635896 61 ntBASIC0.53□□□□□ -2.32
CACNA1AO00555 SNORD114-31-201ENST00000363219 75 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 Y_RNA.421-201ENST00000384052 101 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 RNU6-160P-201ENST00000384591 107 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 MIR493-201ENST00000385254 89 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 RPL22P18-201ENST00000417197 377 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 MTCYBP29-201ENST00000436327 1006 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.53□□□□□ -2.33
CACNA1AO00555 AL357134.1-201ENST00000445848 426 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 OR6C72P-201ENST00000451403 892 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 HMGN2P9-201ENST00000476875 229 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 KLRA1P-201ENST00000503499 986 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
CACNA1AO00555 AC021146.9-201ENST00000512503 156 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.53□□□□□ -2.33
CACNA1AO00555 OR5B19P-201ENST00000531766 928 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.53□□□□□ -2.33
CACNA1AO00555 AC012414.6-201ENST00000568241 401 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.53□□□□□ -2.33
CACNA1AO00555 AL109918.3-201ENST00000603072 338 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 AC015849.6-201ENST00000605454 474 ntBASIC0.53□□□□□ -2.33
CACNA1AO00555 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.53□□□□□ -2.33
CACNA1AO00555 RNU6-1097P-201ENST00000363586 107 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 MIR153-1-201ENST00000384914 90 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.52□□□□□ -2.33
CACNA1AO00555 TOMM22P2-201ENST00000430735 237 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.52□□□□□ -2.33
CACNA1AO00555 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.52□□□□□ -2.33
CACNA1AO00555 RPL31P60-201ENST00000478450 367 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 RPL21P103-201ENST00000479921 488 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.52□□□□□ -2.33
CACNA1AO00555 AC025423.2-201ENST00000537570 439 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.52□□□□□ -2.33
CACNA1AO00555 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.52□□□□□ -2.33
CACNA1AO00555 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.52□□□□□ -2.33
CACNA1AO00555 AC021646.1-201ENST00000605469 484 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 MIR6864-201ENST00000617935 70 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 AP003072.4-201ENST00000624580 310 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 AC110079.1-202ENST00000635213 138 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CACNA1AO00555 SNORA1.3-201ENST00000384676 136 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 TMEM167AP1-201ENST00000423409 219 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 NF1P3-201ENST00000457709 450 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 AP002371.1-201ENST00000463604 433 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 RNU6-158P-201ENST00000517104 100 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 AC084033.1-201ENST00000550830 633 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms