Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC010153.1-201ENST00000432862 727 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RPL7P34-201ENST00000433316 712 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 snoU13.23-201ENST00000458863 104 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AP001324.2-201ENST00000461163 319 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AC021382.1-201ENST00000483523 359 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AC104564.1-201ENST00000493028 407 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-583P-201ENST00000516012 92 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RNA5SP61-201ENST00000516453 100 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-295P-201ENST00000516901 104 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RNA5SP165-201ENST00000517142 115 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 MTCO3P15-201ENST00000526563 574 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 SNRPGP1-201ENST00000553864 222 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR3124-201ENST00000582636 67 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AC243960.4-201ENST00000600532 288 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AC012467.1-201ENST00000607740 256 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 AC103710.2-201ENST00000609912 942 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.17□□□□□ -2.22
TRAV1-1A0A0B4J248 RNA5SP240-201ENST00000365355 128 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 SNORA8-201ENST00000384574 139 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-114P-201ENST00000384704 105 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 CISD1P1-201ENST00000393907 327 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC097463.2-201ENST00000421074 142 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC244636.1-201ENST00000421152 228 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 ISCA1P1-201ENST00000426679 387 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC020550.1-201ENST00000447385 163 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC018868.1-201ENST00000491307 315 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 RPL22P13-201ENST00000493291 347 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC116337.1-201ENST00000509680 687 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC110760.3-202ENST00000515177 371 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 SLC2A13P1-201ENST00000531560 322 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR3167-201ENST00000579623 85 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC011494.1-201ENST00000596454 237 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AL355598.1-201ENST00000604169 202 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AC009237.15-201ENST00000610252 501 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 AL109620.1-201ENST00000618738 1197 ntBASIC1.16□□□□□ -2.22
TRAV1-1A0A0B4J248 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
TRAV1-1A0A0B4J248 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AL161781.1-201ENST00000354277 403 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-1167P-201ENST00000363227 94 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-97P-201ENST00000363387 104 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU6-1207P-201ENST00000384343 107 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR518A2-201ENST00000384966 87 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 SNORA40.19-201ENST00000390846 128 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 SNORA26.9-201ENST00000391322 122 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 RNU2-68P-201ENST00000410878 191 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 OR9R1P-201ENST00000412200 877 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 VN1R36P-201ENST00000414936 291 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 PTGES3P4-201ENST00000426243 356 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC015922.2-201ENST00000435593 184 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 HSPE1P24-201ENST00000450782 238 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 FABP5P15-201ENST00000453566 214 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 RPL18AP17-201ENST00000455326 198 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 BX322784.1-201ENST00000455793 1077 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 CYP2C59P-201ENST00000457790 269 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 HMGB1P35-201ENST00000503360 598 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC093801.2-201ENST00000503966 1050 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC008834.1-201ENST00000511612 175 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 SMURF2P1-201ENST00000514992 481 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC079598.5-201ENST00000547460 117 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC090079.2-201ENST00000575289 768 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AL031274.2-201ENST00000599419 203 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC098483.2-201ENST00000603158 454 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AL161798.1-201ENST00000604630 131 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC009974.1-201ENST00000608881 455 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AP005229.2-201ENST00000609980 697 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC023158.2-201ENST00000614876 543 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC091304.6-201ENST00000619761 202 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 AC084768.2-201ENST00000622736 221 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 LINC02211-204ENST00000642024 1070 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 Z75746.1-201ENST00000440243 2080 ntBASIC1.15□□□□□ -2.23
TRAV1-1A0A0B4J248 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV1-1A0A0B4J248 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms