Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC002550.2-201ENST00000621246 394 ntBASIC1.09□□□□□ -2.23
TRAV27A0A087WT01 AL118508.4-201ENST00000624142 1176 ntBASIC1.09□□□□□ -2.23
TRAV27A0A087WT01 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.09□□□□□ -2.24
TRAV27A0A087WT01 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
TRAV27A0A087WT01 Z75746.1-201ENST00000440243 2080 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 RNA5SP240-201ENST00000365355 128 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 SUGT1P1-201ENST00000379514 476 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 RNU6-338P-201ENST00000383888 105 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 MIR95-201ENST00000385072 81 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 DHFRP6-201ENST00000401776 268 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 RNU4-27P-201ENST00000410889 139 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 EIF4EP2-201ENST00000422816 654 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 CR848007.2-201ENST00000424918 787 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AC010153.1-201ENST00000432862 727 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 RSU1P2-202ENST00000437884 485 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 HMGN2P10-201ENST00000448085 265 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 TMEM251P1-201ENST00000503717 318 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AC098862.1-201ENST00000504991 413 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 SNORA44.1-201ENST00000517031 108 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 RNA5SP165-201ENST00000517142 115 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AC008269.2-201ENST00000561915 1105 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AC090615.1-201ENST00000577519 154 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AC239868.4-201ENST00000608318 671 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AL109620.1-201ENST00000618738 1197 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 AL138713.1-201ENST00000624026 2130 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.08□□□□□ -2.24
TRAV27A0A087WT01 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 SNORA25B-201ENST00000365507 128 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 BTF3L4P2-201ENST00000392798 346 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 RNU2-41P-201ENST00000410991 178 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 RPL26P27-201ENST00000414397 437 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC244035.1-201ENST00000430042 390 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 RPL23AP76-201ENST00000441860 458 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 FDX1P2-201ENST00000450769 375 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 CECR9-201ENST00000453421 199 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 RNU7-95P-201ENST00000459222 64 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 RNU6-362P-201ENST00000516736 90 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC022861.1-201ENST00000522981 663 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 IMMP1LP2-201ENST00000552954 492 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AL121821.2-201ENST00000556081 394 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC090079.2-201ENST00000575289 768 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC018638.7-201ENST00000605836 1114 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AL390208.1-201ENST00000605885 644 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC016911.1-201ENST00000613297 452 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC010133.1-201ENST00000615809 842 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC087821.2-201ENST00000637086 450 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC099063.3-201ENST00000642066 185 ntBASIC1.07□□□□□ -2.24
TRAV27A0A087WT01 AC005539.1-201ENST00000443768 1479 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 SNORA7.1-201ENST00000363750 139 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 CCNG1P1-201ENST00000406783 885 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 SNORA11.2-201ENST00000408318 127 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 OR51A5P-201ENST00000415429 942 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AL158050.1-201ENST00000416077 457 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 UBE2FP1-201ENST00000416536 447 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 RPL30P13-201ENST00000418873 348 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 BTF3L4P3-201ENST00000418879 476 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 TOMM20P4-201ENST00000427861 435 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 USP9YP22-201ENST00000438971 294 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 MOB1AP2-201ENST00000446060 614 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AC009474.2-201ENST00000451383 136 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AC092902.1-201ENST00000486999 259 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 RPL36AP21-201ENST00000490372 323 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AC108210.2-201ENST00000503681 201 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AC084364.2-201ENST00000546924 395 ntBASIC1.06□□□□□ -2.24
TRAV27A0A087WT01 AC125611.1-201ENST00000549563 229 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms