Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 RPL21P109-201ENST00000422213 475 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 HMGB1P9-201ENST00000429856 646 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AL358472.1-201ENST00000431295 329 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 SNAP23P1-201ENST00000433229 246 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 GOT2P5-201ENST00000433995 546 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 HMGB1P18-201ENST00000438801 619 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AL078601.1-201ENST00000444542 271 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 RANP8-201ENST00000444720 713 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 RAB9AP1-201ENST00000449393 573 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU7-138P-201ENST00000459479 64 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC011005.2-201ENST00000487324 359 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 UBE2CP3-201ENST00000502715 450 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-703P-201ENST00000516946 107 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORA31.19-201ENST00000517079 126 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC009902.1-201ENST00000519351 183 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 RAB11AP2-201ENST00000545905 639 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC026464.5-201ENST00000562497 722 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 MIR5692C1-201ENST00000585309 91 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AL117336.2-201ENST00000602435 335 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC087045.1-201ENST00000605856 382 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AC005344.1-201ENST00000613391 459 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 AL121772.2-201ENST00000614331 297 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 Y_RNA.324-201ENST00000365165 102 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 VN1R36P-201ENST00000414936 291 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AL353678.1-201ENST00000422735 741 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AC007560.1-201ENST00000426912 237 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AL136097.1-201ENST00000456945 913 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AC092798.1-201ENST00000458542 409 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AC128713.1-201ENST00000471495 306 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AC103851.1-201ENST00000506833 274 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 TBCAP3-201ENST00000512475 312 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 RPL39P5-202ENST00000512505 151 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 Y_RNA.691-201ENST00000516611 103 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-572P-201ENST00000516724 80 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU7-143P-201ENST00000516781 65 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORA25.17-201ENST00000517184 124 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-323P-201ENST00000521915 107 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 MIR4782-201ENST00000577987 79 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 C8orf59P2-201ENST00000603441 271 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AP000787.2-201ENST00000604432 568 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AC007938.3-201ENST00000604965 623 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AC008962.1-201ENST00000605729 304 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 AL121757.2-201ENST00000611223 313 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 uc_338.15-201ENST00000615470 191 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 U6.99-201ENST00000637524 83 ntBASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PCDHGA3Q9Y5H0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 SRP72P2-201ENST00000344851 1979 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 RNA5SP119-201ENST00000362715 117 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 RNA5SP124-201ENST00000362739 110 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 Y_RNA.61-201ENST00000362835 102 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU2-3P-201ENST00000410144 191 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 RN7SKP156-201ENST00000410308 342 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC007390.1-201ENST00000415722 356 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 RPS15AP6-201ENST00000420703 385 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 ATP5HP2-201ENST00000433885 485 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 TBCAP1-201ENST00000436520 327 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 RPL12P25-201ENST00000455592 494 ntBASIC3.8□□□□□ -1.8
PCDHGA3Q9Y5H0 AMD1P1-201ENST00000457220 922 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms