Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SNORA31.18-201ENST00000517043 134 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.55□□□□□ -2
DDX47Q9H0S4 AP003467.2-201ENST00000520175 319 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AP003122.4-201ENST00000530980 758 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.55□□□□□ -2
DDX47Q9H0S4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.55□□□□□ -2
DDX47Q9H0S4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.55□□□□□ -2
DDX47Q9H0S4 AL121821.2-201ENST00000556081 394 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.55□□□□□ -2
DDX47Q9H0S4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.55□□□□□ -2
DDX47Q9H0S4 MIR3616-201ENST00000584070 92 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDX47Q9H0S4 WISP1-OT1-201ENST00000602893 642 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AL022161.1-201ENST00000604390 213 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 RNU6-87P-201ENST00000607561 108 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AC022893.3-201ENST00000607665 437 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AC087683.2-201ENST00000611384 326 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AC130324.3-201ENST00000614165 542 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AL512643.1-201ENST00000635735 524 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 U6.99-201ENST00000637524 83 ntBASIC2.55□□□□□ -2
DDX47Q9H0S4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
DDX47Q9H0S4 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
DDX47Q9H0S4 SNORA80A-201ENST00000363922 136 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 RNU5E-5P-201ENST00000365379 116 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 Z98749.2-208ENST00000381646 500 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 Y_RNA.560-201ENST00000384689 102 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 U3.37-201ENST00000408528 213 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 RNU6-920P-201ENST00000410926 92 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 OR51A5P-201ENST00000415429 942 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
DDX47Q9H0S4 COX6CP12-201ENST00000446748 202 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.54□□□□□ -2
DDX47Q9H0S4 AC233279.1-201ENST00000455300 423 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.54□□□□□ -2
DDX47Q9H0S4 GZMAP1-201ENST00000503054 631 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 NDUFB4P2-201ENST00000509515 391 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 AC096725.1-201ENST00000514266 313 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.54□□□□□ -2
DDX47Q9H0S4 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 RNU6-232P-201ENST00000517144 64 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.54□□□□□ -2
DDX47Q9H0S4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.54□□□□□ -2
DDX47Q9H0S4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.54□□□□□ -2
DDX47Q9H0S4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.54□□□□□ -2
DDX47Q9H0S4 MIR3167-201ENST00000579623 85 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.54□□□□□ -2
DDX47Q9H0S4 MIR5194-201ENST00000582634 120 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.54□□□□□ -2
DDX47Q9H0S4 AC008121.1-201ENST00000603244 268 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 ATP1B3P1-201ENST00000605365 821 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 AL360219.1-201ENST00000610230 366 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 MIR7106-201ENST00000612419 65 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 AC009878.1-201ENST00000621819 340 ntBASIC2.54□□□□□ -2
DDX47Q9H0S4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.54□□□□□ -2
DDX47Q9H0S4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DDX47Q9H0S4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX47Q9H0S4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX47Q9H0S4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.53□□□□□ -2
DDX47Q9H0S4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.53□□□□□ -2
DDX47Q9H0S4 HSPE1P11-201ENST00000339579 310 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 RNU6-553P-201ENST00000364047 96 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.53□□□□□ -2
DDX47Q9H0S4 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 MIR634-201ENST00000385208 97 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 TAS2R15P-201ENST00000390674 928 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 Z99497.1-201ENST00000421282 135 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 MTND4P20-201ENST00000424125 869 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AL356583.2-201ENST00000426536 280 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AL591704.1-201ENST00000432574 275 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.53□□□□□ -2
DDX47Q9H0S4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.53□□□□□ -2
DDX47Q9H0S4 AC093899.1-201ENST00000457984 376 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AL139824.2-201ENST00000458731 1095 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 BZW1P2-201ENST00000473537 826 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 RPS3AP22-201ENST00000488297 769 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AC096576.1-201ENST00000489014 359 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AC010587.1-201ENST00000505809 469 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 RPL37P25-201ENST00000507308 276 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AC008716.1-201ENST00000511084 513 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 MRPS33P3-201ENST00000513456 322 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.53□□□□□ -2
DDX47Q9H0S4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
DDX47Q9H0S4 RNU6-759P-201ENST00000516740 103 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 RNU6-914P-201ENST00000516749 109 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.53□□□□□ -2
DDX47Q9H0S4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.53□□□□□ -2
DDX47Q9H0S4 AC078814.3-201ENST00000553036 491 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.53□□□□□ -2
DDX47Q9H0S4 AC106782.4-201ENST00000568264 210 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 ROCK1P1-201ENST00000573767 549 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 HMGN1P30-201ENST00000589286 268 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.53□□□□□ -2
DDX47Q9H0S4 AC112191.3-201ENST00000604371 277 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 CU459211.1-201ENST00000635667 749 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.53□□□□□ -2
DDX47Q9H0S4 AC099654.13-201ENST00000639774 207 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms