Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RNU6-600P-201ENST00000362524 99 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.36□□□□□ -2.35
SPENQ96T58 SNORD124-201ENST00000459577 104 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.36□□□□□ -2.35
SPENQ96T58 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.36□□□□□ -2.35
SPENQ96T58 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
SPENQ96T58 MTCYBP41-201ENST00000528913 1123 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AC090616.5-202ENST00000582111 297 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.36□□□□□ -2.35
SPENQ96T58 RNU6-193P-201ENST00000410977 107 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AC241520.1-201ENST00000422654 1099 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AC010627.1-201ENST00000503819 1294 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.36□□□□□ -2.35
SPENQ96T58 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.36□□□□□ -2.35
SPENQ96T58 AL773524.1-201ENST00000614065 229 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 MIR92A1-201ENST00000385233 78 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.36□□□□□ -2.35
SPENQ96T58 AL133384.1-201ENST00000412744 351 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AC104108.1-201ENST00000509930 412 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 SNORA14.1-201ENST00000516113 141 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 Y_RNA.700-201ENST00000516806 100 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 AP006587.4-201ENST00000526053 529 ntBASIC0.36□□□□□ -2.35
SPENQ96T58 RNU4-73P-201ENST00000363164 141 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 RPS4XP3-201ENST00000398541 413 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 MTATP6P7-201ENST00000453315 681 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.35□□□□□ -2.35
SPENQ96T58 MZT1P2-201ENST00000604387 248 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AC103710.4-201ENST00000609301 899 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AL138880.2-201ENST00000616214 239 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 MIR676-201ENST00000390702 67 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AC093155.1-201ENST00000440164 826 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.35□□□□□ -2.35
SPENQ96T58 AC093770.1-201ENST00000511559 571 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.35□□□□□ -2.35
SPENQ96T58 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.35□□□□□ -2.35
SPENQ96T58 MIR5190-201ENST00000581537 80 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AC008163.1-202ENST00000636004 2889 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 ARPC3P5-201ENST00000448802 534 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 OR6C72P-201ENST00000451403 892 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
SPENQ96T58 AC108676.2-201ENST00000605225 163 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AC003001.2-201ENST00000616294 831 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 AL136313.1-201ENST00000624804 202 ntBASIC0.35□□□□□ -2.35
SPENQ96T58 MIR126-201ENST00000362291 85 ntBASIC0.34□□□□□ -2.35
SPENQ96T58 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.35
SPENQ96T58 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.34□□□□□ -2.35
SPENQ96T58 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.34□□□□□ -2.35
SPENQ96T58 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.34□□□□□ -2.35
SPENQ96T58 AP001485.1-201ENST00000604799 199 ntBASIC0.34□□□□□ -2.35
SPENQ96T58 AC013470.4-201ENST00000619978 986 ntBASIC0.34□□□□□ -2.35
SPENQ96T58 RNU1-58P-201ENST00000362413 163 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 Y_RNA.453-201ENST00000384223 109 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 UBE2FP1-201ENST00000416536 447 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.34□□□□□ -2.36
SPENQ96T58 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.34□□□□□ -2.36
SPENQ96T58 NDUFB4P2-201ENST00000509515 391 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 SNORA3.4-201ENST00000515969 96 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.34□□□□□ -2.36
SPENQ96T58 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.34□□□□□ -2.36
SPENQ96T58 MIR32-201ENST00000384965 70 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.34□□□□□ -2.36
SPENQ96T58 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.34□□□□□ -2.36
SPENQ96T58 MTND5P8-201ENST00000449817 1083 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.34□□□□□ -2.36
SPENQ96T58 AC098862.1-201ENST00000504991 413 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 SNORA62.5-201ENST00000516634 120 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AC136628.3-201ENST00000521868 290 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.34□□□□□ -2.36
SPENQ96T58 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.34□□□□□ -2.36
SPENQ96T58 AC067838.1-201ENST00000606064 577 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AC135507.1-201ENST00000607214 561 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AP003476.1-201ENST00000623984 516 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 AC010329.5-201ENST00000623497 2174 ntBASIC0.34□□□□□ -2.36
SPENQ96T58 VN1R36P-201ENST00000414936 291 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 AC083875.1-201ENST00000419509 405 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 RPS29P8-201ENST00000445109 171 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.33□□□□□ -2.36
SPENQ96T58 MTND2P13-201ENST00000577438 1039 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 AC021749.1-201ENST00000604322 607 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 AL021879.1-201ENST00000611756 288 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.33□□□□□ -2.36
SPENQ96T58 MIR153-2-201ENST00000385225 87 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SPENQ96T58 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.33□□□□□ -2.36
SPENQ96T58 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.33□□□□□ -2.36
SPENQ96T58 SEPT2P1-201ENST00000419651 180 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 PRPS1P1-201ENST00000445305 876 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 AL157398.1-201ENST00000452981 186 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.33□□□□□ -2.36
SPENQ96T58 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
SPENQ96T58 RNU6-923P-201ENST00000364753 107 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 AC067940.1-201ENST00000458411 300 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 AC023050.1-201ENST00000498198 304 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.33□□□□□ -2.36
SPENQ96T58 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.33□□□□□ -2.36
SPENQ96T58 PRR13P7-201ENST00000605538 430 ntBASIC0.33□□□□□ -2.36
SPENQ96T58 OFD1P18Y-201ENST00000420889 959 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms