Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC027807.2-201ENST00000616099 408 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC010297.1-201ENST00000623948 149 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 AC017037.3-201ENST00000625016 472 ntBASIC2.34□□□□□ -2.03
NIPAL3Q6P499 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NIPAL3Q6P499 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.04
NIPAL3Q6P499 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NIPAL3Q6P499 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.34□□□□□ -2.04
NIPAL3Q6P499 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AL359854.1-201ENST00000614203 1594 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 HSPE1P11-201ENST00000339579 310 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 SNORD62.1-201ENST00000362541 86 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 Y_RNA.534-201ENST00000384599 112 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AL139095.1-201ENST00000404326 391 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 Y_RNA.608-201ENST00000410647 95 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 MTCO2P17-201ENST00000424336 677 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC007560.1-201ENST00000426912 237 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AL591704.1-201ENST00000432574 275 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AP000936.2-201ENST00000447151 681 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC133134.1-201ENST00000466800 359 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC112673.1-201ENST00000513168 575 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 RNU6-914P-201ENST00000516749 109 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 RNA5SP337-201ENST00000517007 109 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 RNU6-1315P-201ENST00000517187 99 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC009902.1-201ENST00000519351 183 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC009163.5-201ENST00000575421 637 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 MIR4319-201ENST00000577285 85 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC007938.3-201ENST00000604965 623 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AL031775.1-201ENST00000607014 887 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AL355816.2-201ENST00000610049 647 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 AC023510.2-201ENST00000622162 746 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 CU459211.1-201ENST00000635667 749 ntBASIC2.33□□□□□ -2.04
NIPAL3Q6P499 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 RNU6-1280P-201ENST00000365211 107 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 MIR196B-201ENST00000384852 84 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 HMGN2P35-201ENST00000412164 270 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 OR51A5P-201ENST00000415429 942 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC092809.3-201ENST00000415453 231 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 BX276092.3-201ENST00000424182 230 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC063976.3-201ENST00000426849 329 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AP001324.2-201ENST00000461163 319 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AP001486.1-201ENST00000463339 476 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AP000797.1-201ENST00000478870 387 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 SNORA31.19-201ENST00000517079 126 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 ZNF321P-202ENST00000550843 495 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 LINC00933-203ENST00000559812 219 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 MIR5571-201ENST00000577998 113 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC090616.2-202ENST00000584248 222 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 MIR4760-201ENST00000585040 80 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 NRBF2P1-201ENST00000587407 859 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC069294.1-201ENST00000608397 350 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 MIR6134-201ENST00000617606 109 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 AC092608.2-201ENST00000624427 218 ntBASIC2.32□□□□□ -2.04
NIPAL3Q6P499 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NIPAL3Q6P499 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NIPAL3Q6P499 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NIPAL3Q6P499 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.31□□□□□ -2.04
NIPAL3Q6P499 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.31□□□□□ -2.04
NIPAL3Q6P499 AC073343.1-201ENST00000328239 651 ntBASIC2.31□□□□□ -2.04
NIPAL3Q6P499 SNORD56.2-201ENST00000363242 71 ntBASIC2.31□□□□□ -2.04
NIPAL3Q6P499 RNU5E-5P-201ENST00000365379 116 ntBASIC2.31□□□□□ -2.04
NIPAL3Q6P499 SNORA4.3-201ENST00000365564 137 ntBASIC2.31□□□□□ -2.04
NIPAL3Q6P499 MIR34A-201ENST00000385130 110 ntBASIC2.31□□□□□ -2.04
NIPAL3Q6P499 RNU6-1025P-201ENST00000410629 104 ntBASIC2.31□□□□□ -2.04
NIPAL3Q6P499 RNA5SP184-201ENST00000411071 108 ntBASIC2.31□□□□□ -2.04
NIPAL3Q6P499 AC080125.1-201ENST00000414888 684 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms