Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
ABCA4P78363 AP000648.3-201ENST00000623539 4507 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 DBF4P1-201ENST00000412976 1892 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 GDI2P1-201ENST00000429312 1336 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
ABCA4P78363 MIR126-201ENST00000362291 85 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AP002784.2-201ENST00000397300 549 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA4P78363 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA4P78363 AL121601.2-201ENST00000438019 707 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 PNPLA4P1-201ENST00000458328 305 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AC026801.1-201ENST00000497178 464 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 RNU6-760P-201ENST00000516078 97 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 RN7SKP265-201ENST00000516448 223 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 RNU6-1256P-201ENST00000516539 103 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 RNU7-193P-201ENST00000516723 65 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AC068338.1-201ENST00000565567 176 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC123912.5-201ENST00000605470 343 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AC073569.3-201ENST00000619055 682 ntBASIC0.99□□□□□ -2.25
ABCA4P78363 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.99□□□□□ -2.25
ABCA4P78363 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
ABCA4P78363 DDX43P2-201ENST00000604753 1354 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 MFSD8-213ENST00000641134 1327 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
ABCA4P78363 SNORA40.19-201ENST00000390846 128 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AL356421.1-201ENST00000403255 413 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 EBAG9P1-201ENST00000418955 543 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 SNRPEP10-201ENST00000420249 274 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA4P78363 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.98□□□□□ -2.25
ABCA4P78363 AL049734.2-201ENST00000441066 616 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.98□□□□□ -2.25
ABCA4P78363 ARL2BPP4-201ENST00000506854 471 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.98□□□□□ -2.25
ABCA4P78363 AC091965.2-201ENST00000512324 613 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.98□□□□□ -2.25
ABCA4P78363 NIFKP8-201ENST00000560500 874 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.98□□□□□ -2.25
ABCA4P78363 uc_338.14-201ENST00000613162 166 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AC083806.3-201ENST00000614016 455 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AC022513.1-201ENST00000624512 117 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AC083865.1-201ENST00000636634 831 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
ABCA4P78363 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
ABCA4P78363 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
ABCA4P78363 RNU6-251P-201ENST00000363235 104 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 RNU6-270P-201ENST00000364131 105 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 TMSB4XP8-201ENST00000402089 135 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 TMSB4XP6-201ENST00000415187 135 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 FCF1P2-201ENST00000415284 583 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA4P78363 TMSB4XP1-201ENST00000424567 135 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AL590233.1-201ENST00000430017 456 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
ABCA4P78363 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA4P78363 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA4P78363 snoU109.1-201ENST00000459339 135 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 PABPC1P3-201ENST00000469174 459 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA4P78363 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA4P78363 RNU2-44P-201ENST00000516795 194 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.98□□□□□ -2.25
ABCA4P78363 AP004607.1-201ENST00000524456 203 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.98□□□□□ -2.25
ABCA4P78363 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.98□□□□□ -2.25
ABCA4P78363 AC233266.2-201ENST00000567067 528 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.98□□□□□ -2.25
ABCA4P78363 AC069294.1-201ENST00000608397 350 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AL773524.1-201ENST00000614065 229 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 AC107905.1-201ENST00000616204 426 ntBASIC0.98□□□□□ -2.25
ABCA4P78363 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 U8.14-201ENST00000390843 143 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 CISD1P1-201ENST00000393907 327 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 AC093106.2-201ENST00000428212 385 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 AL512637.2-201ENST00000431287 1256 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 AP000949.1-201ENST00000438328 629 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
ABCA4P78363 AC098831.1-201ENST00000440661 216 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.97□□□□□ -2.25
ABCA4P78363 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.97□□□□□ -2.25
ABCA4P78363 RPL26P9-201ENST00000457466 433 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.97□□□□□ -2.25
ABCA4P78363 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ABCA4P78363 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.97□□□□□ -2.25
ABCA4P78363 CYCSP2-201ENST00000558168 301 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 AC023825.1-201ENST00000566704 1030 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 RN7SL793P-201ENST00000583259 296 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.97□□□□□ -2.25
ABCA4P78363 MTND4LP5-201ENST00000605152 292 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.97□□□□□ -2.25
ABCA4P78363 AC110491.1-201ENST00000562191 2010 ntBASIC0.97□□□□□ -2.25
ABCA4P78363 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
ABCA4P78363 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.96□□□□□ -2.26
ABCA4P78363 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.96□□□□□ -2.26
ABCA4P78363 MIR514A1-201ENST00000385133 98 ntBASIC0.96□□□□□ -2.26
ABCA4P78363 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms