Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C8orf59P2-201ENST00000603441 271 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AC092747.3-201ENST00000603769 301 ntBASIC3.15□□□□□ -1.91
CDH12P55289 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH12P55289 AC069234.5-201ENST00000611056 416 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AL121772.2-201ENST00000614331 297 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AL110115.1-201ENST00000614396 364 ntBASIC3.15□□□□□ -1.91
CDH12P55289 AC099654.5-201ENST00000636479 350 ntBASIC3.15□□□□□ -1.91
CDH12P55289 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CDH12P55289 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDH12P55289 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH12P55289 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH12P55289 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.15□□□□□ -1.91
CDH12P55289 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH12P55289 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH12P55289 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH12P55289 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CDH12P55289 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDH12P55289 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
CDH12P55289 SNORA73.2-201ENST00000364946 201 ntBASIC3.14□□□□□ -1.91
CDH12P55289 RNU6-805P-201ENST00000365643 106 ntBASIC3.14□□□□□ -1.91
CDH12P55289 MIR578-201ENST00000384828 96 ntBASIC3.14□□□□□ -1.91
CDH12P55289 MIR325-201ENST00000385260 98 ntBASIC3.14□□□□□ -1.91
CDH12P55289 RNU6-1197P-201ENST00000391183 107 ntBASIC3.14□□□□□ -1.91
CDH12P55289 SNORA57.1-201ENST00000391227 145 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC063979.1-201ENST00000415539 377 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH12P55289 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH12P55289 NDUFB4P6-201ENST00000436819 366 ntBASIC3.14□□□□□ -1.91
CDH12P55289 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AL360271.2-201ENST00000447710 161 ntBASIC3.14□□□□□ -1.91
CDH12P55289 RNU6-329P-201ENST00000459618 107 ntBASIC3.14□□□□□ -1.91
CDH12P55289 RPS4XP13-201ENST00000483219 789 ntBASIC3.14□□□□□ -1.91
CDH12P55289 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH12P55289 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH12P55289 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH12P55289 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH12P55289 RNU7-30P-201ENST00000516835 62 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AP001804.3-201ENST00000525146 880 ntBASIC3.14□□□□□ -1.91
CDH12P55289 CASP1P1-201ENST00000526345 212 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC090115.3-201ENST00000553218 849 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH12P55289 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH12P55289 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH12P55289 MTCO3P23-201ENST00000561363 289 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH12P55289 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH12P55289 AC106782.4-201ENST00000568264 210 ntBASIC3.14□□□□□ -1.91
CDH12P55289 MIR4742-201ENST00000581069 85 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC093227.2-201ENST00000589357 285 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC073539.2-201ENST00000597113 165 ntBASIC3.14□□□□□ -1.91
CDH12P55289 Z82243.1-201ENST00000609432 473 ntBASIC3.14□□□□□ -1.91
CDH12P55289 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC093913.1-201ENST00000614178 329 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC103705.1-201ENST00000619013 241 ntBASIC3.14□□□□□ -1.91
CDH12P55289 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC121333.1-201ENST00000567488 2709 ntBASIC3.14□□□□□ -1.91
CDH12P55289 AC007785.2-201ENST00000598627 1916 ntBASIC3.14□□□□□ -1.91
CDH12P55289 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH12P55289 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH12P55289 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH12P55289 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH12P55289 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH12P55289 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH12P55289 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH12P55289 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CDH12P55289 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH12P55289 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
CDH12P55289 Y_RNA.245-201ENST00000364493 95 ntBASIC3.13□□□□□ -1.91
CDH12P55289 Y_RNA.399-201ENST00000383955 105 ntBASIC3.13□□□□□ -1.91
CDH12P55289 RNU6-434P-201ENST00000384376 107 ntBASIC3.13□□□□□ -1.91
CDH12P55289 RNA5SP219-201ENST00000390940 113 ntBASIC3.13□□□□□ -1.91
CDH12P55289 RNU6-510P-201ENST00000391239 108 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AL445189.1-201ENST00000405722 338 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AL356432.1-201ENST00000405809 419 ntBASIC3.13□□□□□ -1.91
CDH12P55289 MIR1193-201ENST00000408109 78 ntBASIC3.13□□□□□ -1.91
CDH12P55289 CYCSP19-201ENST00000411715 316 ntBASIC3.13□□□□□ -1.91
CDH12P55289 MTND3P8-201ENST00000412909 339 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AL590383.1-201ENST00000428602 75 ntBASIC3.13□□□□□ -1.91
CDH12P55289 CYCSP4-201ENST00000429682 331 ntBASIC3.13□□□□□ -1.91
CDH12P55289 MTND3P23-201ENST00000431980 347 ntBASIC3.13□□□□□ -1.91
CDH12P55289 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH12P55289 RPL37P6-201ENST00000460682 294 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AL135752.1-201ENST00000479477 471 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AC068587.1-201ENST00000483613 781 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AC104619.4-201ENST00000510773 249 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AC104136.1-201ENST00000512969 394 ntBASIC3.13□□□□□ -1.91
CDH12P55289 RNU6-189P-201ENST00000516120 101 ntBASIC3.13□□□□□ -1.91
CDH12P55289 RNU1-95P-201ENST00000516357 160 ntBASIC3.13□□□□□ -1.91
CDH12P55289 RNU1-128P-201ENST00000516704 160 ntBASIC3.13□□□□□ -1.91
CDH12P55289 RNA5SP290-201ENST00000517133 127 ntBASIC3.13□□□□□ -1.91
CDH12P55289 RNU6-1315P-201ENST00000517187 99 ntBASIC3.13□□□□□ -1.91
CDH12P55289 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.13□□□□□ -1.91
CDH12P55289 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH12P55289 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH12P55289 ATP5F1P5-201ENST00000526403 760 ntBASIC3.13□□□□□ -1.91
CDH12P55289 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDH12P55289 TRAV28-201ENST00000557548 323 ntBASIC3.13□□□□□ -1.91
CDH12P55289 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH12P55289 VN1R80P-201ENST00000597126 338 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms