Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH6P55285 AL354692.1-201ENST00000423044 315 ntBASIC2.13□□□□□ -2.07
CDH6P55285 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH6P55285 EIF4EP4-201ENST00000424916 578 ntBASIC2.13□□□□□ -2.07
CDH6P55285 Z98742.2-201ENST00000431564 187 ntBASIC2.13□□□□□ -2.07
CDH6P55285 UBE2D3P1-201ENST00000436669 444 ntBASIC2.13□□□□□ -2.07
CDH6P55285 GPM6BP3-201ENST00000442797 145 ntBASIC2.13□□□□□ -2.07
CDH6P55285 KLF3P2-201ENST00000465138 268 ntBASIC2.13□□□□□ -2.07
CDH6P55285 MTND3P3-201ENST00000505004 126 ntBASIC2.13□□□□□ -2.07
CDH6P55285 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH6P55285 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CDH6P55285 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CDH6P55285 RPL23AP94-201ENST00000512518 302 ntBASIC2.13□□□□□ -2.07
CDH6P55285 DEFB108A-201ENST00000530110 222 ntBASIC2.13□□□□□ -2.07
CDH6P55285 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH6P55285 AC091544.4-201ENST00000555268 342 ntBASIC2.13□□□□□ -2.07
CDH6P55285 AL133241.1-201ENST00000556832 487 ntBASIC2.13□□□□□ -2.07
CDH6P55285 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.13□□□□□ -2.07
CDH6P55285 AL391001.1-201ENST00000602747 715 ntBASIC2.13□□□□□ -2.07
CDH6P55285 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.13□□□□□ -2.07
CDH6P55285 AC097468.3-201ENST00000607956 456 ntBASIC2.13□□□□□ -2.07
CDH6P55285 AL356266.1-201ENST00000623311 483 ntBASIC2.13□□□□□ -2.07
CDH6P55285 MIR219B-201ENST00000637023 88 ntBASIC2.13□□□□□ -2.07
CDH6P55285 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.13□□□□□ -2.07
CDH6P55285 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CDH6P55285 ZNF29P-201ENST00000225587 168 ntBASIC2.12□□□□□ -2.07
CDH6P55285 SNORA67.3-201ENST00000384366 140 ntBASIC2.12□□□□□ -2.07
CDH6P55285 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AL139156.1-201ENST00000412785 841 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH6P55285 AL445669.1-201ENST00000426743 755 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH6P55285 AC027124.2-201ENST00000428249 105 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH6P55285 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH6P55285 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH6P55285 AC108059.3-201ENST00000456388 214 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH6P55285 AC072039.1-201ENST00000477611 581 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH6P55285 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH6P55285 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
CDH6P55285 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CDH6P55285 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH6P55285 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH6P55285 AC068587.4-201ENST00000533893 186 ntBASIC2.12□□□□□ -2.07
CDH6P55285 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.12□□□□□ -2.07
CDH6P55285 ROCK1P1-201ENST00000573767 549 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AC097478.2-201ENST00000610572 514 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH6P55285 AC024581.2-201ENST00000619986 252 ntBASIC2.12□□□□□ -2.07
CDH6P55285 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH6P55285 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
CDH6P55285 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDH6P55285 HSPA8P4-201ENST00000511877 1920 ntBASIC2.11□□□□□ -2.07
CDH6P55285 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDH6P55285 RNU5A-8P-201ENST00000364102 114 ntBASIC2.11□□□□□ -2.07
CDH6P55285 RNU6-723P-201ENST00000383973 107 ntBASIC2.11□□□□□ -2.07
CDH6P55285 RNU6-301P-201ENST00000384277 107 ntBASIC2.11□□□□□ -2.07
CDH6P55285 RNU6-906P-201ENST00000384700 70 ntBASIC2.11□□□□□ -2.07
CDH6P55285 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDH6P55285 AC119751.3-201ENST00000399720 670 ntBASIC2.11□□□□□ -2.07
CDH6P55285 NDUFS5P1-201ENST00000405668 289 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH6P55285 USP9YP24-201ENST00000434374 697 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.11□□□□□ -2.07
CDH6P55285 AC124916.1-201ENST00000444020 547 ntBASIC2.11□□□□□ -2.07
CDH6P55285 USP9YP17-201ENST00000444617 696 ntBASIC2.11□□□□□ -2.07
CDH6P55285 OR6C5P-201ENST00000452388 923 ntBASIC2.11□□□□□ -2.07
CDH6P55285 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH6P55285 MTND2P39-201ENST00000457230 764 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AL441985.1-201ENST00000457727 251 ntBASIC2.11□□□□□ -2.07
CDH6P55285 RPL23AP41-201ENST00000484754 458 ntBASIC2.11□□□□□ -2.07
CDH6P55285 ANXA2P1-201ENST00000505539 926 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.11□□□□□ -2.07
CDH6P55285 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH6P55285 IGKV3-31-201ENST00000523109 329 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AP000907.2-201ENST00000530827 353 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AP000889.1-201ENST00000530968 660 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AL138976.2-201ENST00000563989 694 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AC136618.2-201ENST00000575091 400 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH6P55285 NRBF2P1-201ENST00000587407 859 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH6P55285 AC073544.2-201ENST00000601155 540 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AC005014.3-201ENST00000605985 190 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AC107214.2-201ENST00000608204 634 ntBASIC2.11□□□□□ -2.07
CDH6P55285 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AL161423.1-201ENST00000613700 262 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AP000484.1-201ENST00000620067 1252 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AL356596.1-201ENST00000624230 379 ntBASIC2.11□□□□□ -2.07
CDH6P55285 AL136313.1-201ENST00000624804 202 ntBASIC2.11□□□□□ -2.07
CDH6P55285 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDH6P55285 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CDH6P55285 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CDH6P55285 FAM133CP-201ENST00000332869 704 ntBASIC2.1□□□□□ -2.07
CDH6P55285 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDH6P55285 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDH6P55285 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms