Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 AC009902.3-201ENST00000606235 2172 ntBASIC3□□□□□ -1.93
CLK1P49759 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
CLK1P49759 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 Y_RNA.402-201ENST00000383972 102 ntBASIC3□□□□□ -1.93
CLK1P49759 SNORA46-201ENST00000384762 135 ntBASIC3□□□□□ -1.93
CLK1P49759 FGF7P8-201ENST00000402994 292 ntBASIC3□□□□□ -1.93
CLK1P49759 AL139095.1-201ENST00000404326 391 ntBASIC3□□□□□ -1.93
CLK1P49759 AL451054.2-201ENST00000420896 202 ntBASIC3□□□□□ -1.93
CLK1P49759 AL109913.1-201ENST00000421173 514 ntBASIC3□□□□□ -1.93
CLK1P49759 ACTR3BP6-201ENST00000422332 1241 ntBASIC3□□□□□ -1.93
CLK1P49759 AC019097.1-201ENST00000424783 735 ntBASIC3□□□□□ -1.93
CLK1P49759 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3□□□□□ -1.93
CLK1P49759 AL159987.2-201ENST00000432754 307 ntBASIC3□□□□□ -1.93
CLK1P49759 AL121601.2-201ENST00000438019 707 ntBASIC3□□□□□ -1.93
CLK1P49759 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3□□□□□ -1.93
CLK1P49759 MTND1P12-201ENST00000455231 147 ntBASIC3□□□□□ -1.93
CLK1P49759 EIF4EP3-201ENST00000498782 656 ntBASIC3□□□□□ -1.93
CLK1P49759 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3□□□□□ -1.93
CLK1P49759 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3□□□□□ -1.93
CLK1P49759 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3□□□□□ -1.93
CLK1P49759 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3□□□□□ -1.93
CLK1P49759 Y_RNA.704-201ENST00000516851 102 ntBASIC3□□□□□ -1.93
CLK1P49759 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3□□□□□ -1.93
CLK1P49759 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3□□□□□ -1.93
CLK1P49759 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3□□□□□ -1.93
CLK1P49759 AL157687.1-201ENST00000554853 619 ntBASIC3□□□□□ -1.93
CLK1P49759 AC005951.2-201ENST00000576282 495 ntBASIC3□□□□□ -1.93
CLK1P49759 MIR3167-201ENST00000579623 85 ntBASIC3□□□□□ -1.93
CLK1P49759 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3□□□□□ -1.93
CLK1P49759 MIR5194-201ENST00000582634 120 ntBASIC3□□□□□ -1.93
CLK1P49759 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3□□□□□ -1.93
CLK1P49759 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3□□□□□ -1.93
CLK1P49759 AP000907.4-201ENST00000604143 237 ntBASIC3□□□□□ -1.93
CLK1P49759 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3□□□□□ -1.93
CLK1P49759 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLK1P49759 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3□□□□□ -1.93
CLK1P49759 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
CLK1P49759 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CLK1P49759 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLK1P49759 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLK1P49759 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLK1P49759 RNU6-534P-201ENST00000364877 106 ntBASIC2.99□□□□□ -1.93
CLK1P49759 Y_RNA.453-201ENST00000384223 109 ntBASIC2.99□□□□□ -1.93
CLK1P49759 RNU6-114P-201ENST00000384704 105 ntBASIC2.99□□□□□ -1.93
CLK1P49759 MIR183-201ENST00000384958 110 ntBASIC2.99□□□□□ -1.93
CLK1P49759 SNORA48.7-201ENST00000391302 135 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC127391.1-201ENST00000411737 98 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.99□□□□□ -1.93
CLK1P49759 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.99□□□□□ -1.93
CLK1P49759 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC091390.3-201ENST00000426478 338 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
CLK1P49759 OR2AS1P-201ENST00000427827 319 ntBASIC2.99□□□□□ -1.93
CLK1P49759 ELOCP14-201ENST00000428070 331 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC002486.1-201ENST00000435098 391 ntBASIC2.99□□□□□ -1.93
CLK1P49759 ELOCP7-201ENST00000439968 331 ntBASIC2.99□□□□□ -1.93
CLK1P49759 MTCO3P18-201ENST00000440206 761 ntBASIC2.99□□□□□ -1.93
CLK1P49759 OSTCP8-201ENST00000445117 448 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AL162389.1-201ENST00000449233 177 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC233279.1-201ENST00000455300 423 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.99□□□□□ -1.93
CLK1P49759 AP000852.1-201ENST00000472460 573 ntBASIC2.99□□□□□ -1.93
CLK1P49759 RPS29P25-201ENST00000481709 171 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC010587.1-201ENST00000505809 469 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC110794.1-201ENST00000505816 425 ntBASIC2.99□□□□□ -1.93
CLK1P49759 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.99□□□□□ -1.93
CLK1P49759 Y_RNA.693-201ENST00000516641 110 ntBASIC2.99□□□□□ -1.93
CLK1P49759 Vault.3-201ENST00000516676 95 ntBASIC2.99□□□□□ -1.93
CLK1P49759 RNU6-1220P-201ENST00000517126 108 ntBASIC2.99□□□□□ -1.93
CLK1P49759 BTF3P12-201ENST00000519620 469 ntBASIC2.99□□□□□ -1.93
CLK1P49759 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.99□□□□□ -1.93
CLK1P49759 AP002404.1-201ENST00000532005 451 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC007458.1-201ENST00000542812 373 ntBASIC2.99□□□□□ -1.93
CLK1P49759 MIR4276-201ENST00000584832 70 ntBASIC2.99□□□□□ -1.93
CLK1P49759 MTND4LP5-201ENST00000605152 292 ntBASIC2.99□□□□□ -1.93
CLK1P49759 MIR98-201ENST00000606724 119 ntBASIC2.99□□□□□ -1.93
CLK1P49759 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.99□□□□□ -1.93
CLK1P49759 AL157817.1-201ENST00000614264 790 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AL133173.2-201ENST00000614270 90 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC002553.4-201ENST00000616896 331 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC006338.1-201ENST00000618453 749 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC092794.2-201ENST00000620933 563 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC091903.1-201ENST00000624322 454 ntBASIC2.99□□□□□ -1.93
CLK1P49759 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.99□□□□□ -1.93
CLK1P49759 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLK1P49759 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.99□□□□□ -1.93
CLK1P49759 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLK1P49759 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CLK1P49759 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.98□□□□□ -1.93
CLK1P49759 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLK1P49759 RNA5SP393-201ENST00000363423 117 ntBASIC2.98□□□□□ -1.93
CLK1P49759 RNU6-884P-201ENST00000363889 107 ntBASIC2.98□□□□□ -1.93
CLK1P49759 RNY4P16-201ENST00000364768 94 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms