Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD4P46934 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.8□□□□□ -1.96
NEDD4P46934 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.8□□□□□ -1.96
NEDD4P46934 AC087588.1-201ENST00000462203 316 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 AC008571.1-201ENST00000467232 300 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 RPS20P22-201ENST00000473700 357 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.8□□□□□ -1.96
NEDD4P46934 MTCO3P7-201ENST00000510008 774 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.8□□□□□ -1.96
NEDD4P46934 RNU6-927P-201ENST00000516199 100 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 RNU6-1256P-201ENST00000516539 103 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 Vault.3-201ENST00000516676 95 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 RNU6-1282P-201ENST00000516735 96 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 RN7SKP258-201ENST00000517151 304 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 RNA5SP291-201ENST00000517222 105 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD4P46934 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD4P46934 AC245014.2-201ENST00000603689 287 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 AC246785.4-201ENST00000605374 287 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 AL133173.2-201ENST00000614270 90 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 AC068831.7-201ENST00000616954 363 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 AC027309.3-201ENST00000623419 351 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 AC092656.1-203ENST00000624134 423 ntBASIC2.8□□□□□ -1.96
NEDD4P46934 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD4P46934 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.79□□□□□ -1.96
NEDD4P46934 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
NEDD4P46934 HSPE1P11-201ENST00000339579 310 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 RNU6-960P-201ENST00000364056 120 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 RNU5E-6P-201ENST00000365574 115 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.79□□□□□ -1.96
NEDD4P46934 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD4P46934 RNU6-348P-201ENST00000384386 107 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 SAR1AP2-201ENST00000392696 594 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 RPS3AP36-201ENST00000398190 775 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 RPS4XP3-201ENST00000398541 413 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 RPS4XP7-201ENST00000406274 780 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 C1DP2-201ENST00000418167 426 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 RAC1P6-201ENST00000423911 575 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 ARPC3P1-201ENST00000437218 533 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 HMGN2P20-201ENST00000437531 273 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 AL031667.1-201ENST00000440222 725 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.79□□□□□ -1.96
NEDD4P46934 AC013267.1-201ENST00000458227 267 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 RAP1BP2-201ENST00000478270 544 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD4P46934 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.79□□□□□ -1.96
NEDD4P46934 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.79□□□□□ -1.96
NEDD4P46934 AC087883.1-201ENST00000551882 391 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.79□□□□□ -1.96
NEDD4P46934 AC010653.1-201ENST00000571108 881 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 MIR4474-201ENST00000579189 78 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 MIR3611-201ENST00000584484 83 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 AC002545.1-201ENST00000592511 181 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.79□□□□□ -1.96
NEDD4P46934 AC025034.2-201ENST00000623264 286 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NEDD4P46934 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD4P46934 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NEDD4P46934 AC007785.2-201ENST00000598627 1916 ntBASIC2.79□□□□□ -1.96
NEDD4P46934 RNU6-623P-201ENST00000363143 105 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 SNORD56.2-201ENST00000363242 71 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 Y_RNA.194-201ENST00000363985 102 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 SNORD114-30-201ENST00000364448 72 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 RNU6-741P-201ENST00000383889 107 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 SNORA20.2-201ENST00000383922 131 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 RNU6-301P-201ENST00000384277 107 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 DEFB108C-201ENST00000400154 252 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 AL663109.1-201ENST00000411498 844 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 ATG3P1-201ENST00000419507 911 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 ELOCP4-201ENST00000420090 333 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 PIGFP2-201ENST00000421400 651 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.78□□□□□ -1.96
NEDD4P46934 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.78□□□□□ -1.96
NEDD4P46934 ISCA1P6-201ENST00000427740 390 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 MYL8P-204ENST00000431574 518 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 MTCO3P5-201ENST00000433620 714 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 HIGD1AP11-201ENST00000438361 280 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 AL590664.1-201ENST00000448065 339 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.78□□□□□ -1.96
NEDD4P46934 RN7SKP298-201ENST00000515950 94 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 RNU7-51P-201ENST00000516560 62 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.78□□□□□ -1.96
NEDD4P46934 AC135279.1-201ENST00000543493 504 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 ARL2BPP2-201ENST00000550907 489 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 HMGB1P14-201ENST00000557424 591 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.78□□□□□ -1.96
NEDD4P46934 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.78□□□□□ -1.96
NEDD4P46934 AC008962.1-201ENST00000605729 304 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 AL161734.1-201ENST00000609720 557 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 AL138880.2-201ENST00000616214 239 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.78□□□□□ -1.96
NEDD4P46934 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.78□□□□□ -1.97
NEDD4P46934 AC022336.2-201ENST00000568966 2538 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.77□□□□□ -1.97
NEDD4P46934 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.77□□□□□ -1.97
NEDD4P46934 RNU1-51P-201ENST00000365345 176 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 RNU6-1042P-201ENST00000384204 107 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 RNU6-1119P-201ENST00000384349 108 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 Z85995.1-201ENST00000415547 335 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 RPL7P10-201ENST00000417407 739 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms