Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL591516.1-201ENST00000611326 274 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 U6.114-201ENST00000636407 96 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.73□□□□□ -1.97
NKX2-1P43699 AL356274.2-201ENST00000624379 3752 ntBASIC2.73□□□□□ -1.97
NKX2-1P43699 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.73□□□□□ -1.97
NKX2-1P43699 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.73□□□□□ -1.97
NKX2-1P43699 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX2-1P43699 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX2-1P43699 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NKX2-1P43699 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AC099654.7-201ENST00000635788 2127 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NKX2-1P43699 Y_RNA.38-201ENST00000362617 102 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RNU6-552P-201ENST00000362869 119 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 U3.6-201ENST00000363622 211 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RNU6-884P-201ENST00000363889 107 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RNU6-1090P-201ENST00000364065 94 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RNA5SP515-201ENST00000364570 118 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RNA5SP479-201ENST00000364858 117 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 Y_RNA.399-201ENST00000383955 105 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RNU1-73P-201ENST00000383971 164 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 SNORA57.1-201ENST00000391227 145 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NKX2-1P43699 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AC007389.2-201ENST00000434630 306 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX2-1P43699 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX2-1P43699 FABP5P13-201ENST00000452144 328 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RPL26P9-201ENST00000457466 433 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AC233702.1-201ENST00000482905 502 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RN7SL283P-201ENST00000489055 303 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AC092185.1-201ENST00000491371 97 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AC116353.2-201ENST00000505332 712 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AC104806.1-201ENST00000508720 308 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AC104136.1-201ENST00000512969 394 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-1P43699 Y_RNA.704-201ENST00000516851 102 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 RNU6-1315P-201ENST00000517187 99 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AF235103.2-201ENST00000525753 346 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-1P43699 RANP3-201ENST00000530970 276 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AL137161.1-201ENST00000532231 390 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.72□□□□□ -1.97
NKX2-1P43699 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.72□□□□□ -1.97
NKX2-1P43699 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.72□□□□□ -1.97
NKX2-1P43699 AC093536.2-201ENST00000565257 1406 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 MIR15A-201ENST00000607334 83 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 AC024940.5-201ENST00000622889 474 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 Z99571.1-201ENST00000636677 394 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX2-1P43699 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NKX2-1P43699 AL161912.2-201ENST00000565707 3007 ntBASIC2.72□□□□□ -1.97
NKX2-1P43699 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.97
NKX2-1P43699 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NKX2-1P43699 SNORD9-201ENST00000362566 104 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 RNU6-371P-201ENST00000364283 108 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 U3.12-201ENST00000364498 214 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 Y_RNA.295-201ENST00000364918 102 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 RNU6-395P-201ENST00000365662 106 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.71□□□□□ -1.98
NKX2-1P43699 RNU6-877P-201ENST00000383868 107 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 RNU6-550P-201ENST00000391057 101 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-1P43699 DBIP2-201ENST00000419076 262 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-1P43699 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.71□□□□□ -1.98
NKX2-1P43699 CYCSP32-201ENST00000440548 321 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 AC098831.1-201ENST00000440661 216 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.71□□□□□ -1.98
NKX2-1P43699 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-1P43699 AC091179.1-201ENST00000461606 579 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX2-1P43699 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-1P43699 AC026402.1-201ENST00000513642 170 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.71□□□□□ -1.98
NKX2-1P43699 SNORA70.18-201ENST00000516696 98 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-1P43699 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.71□□□□□ -1.98
NKX2-1P43699 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NKX2-1P43699 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NKX2-1P43699 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-1P43699 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX2-1P43699 AL138889.2-201ENST00000603883 242 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 AC004832.5-201ENST00000608677 401 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX2-1P43699 AL512643.1-201ENST00000635735 524 ntBASIC2.71□□□□□ -1.98
NKX2-1P43699 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.71□□□□□ -1.98
NKX2-1P43699 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NKX2-1P43699 AL354685.2-201ENST00000448218 1447 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC110491.1-201ENST00000562191 2010 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 NACAP2-201ENST00000318548 624 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 Y_RNA.157-201ENST00000363638 102 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms