Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.13□□□□□ -1.91
ABCD3P28288 AC006020.1-201ENST00000420179 1854 ntBASIC3.13□□□□□ -1.91
ABCD3P28288 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ABCD3P28288 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ABCD3P28288 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
ABCD3P28288 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ABCD3P28288 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ABCD3P28288 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ABCD3P28288 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ABCD3P28288 RNU6-552P-201ENST00000362869 119 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 SNORA75B-201ENST00000384053 137 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 RNU6-1179P-201ENST00000384667 107 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 CALM2P3-201ENST00000400429 449 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 UBE2V1P10-201ENST00000414685 269 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 AL353678.1-201ENST00000422735 741 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 AL606489.2-201ENST00000433886 234 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC005019.1-201ENST00000436455 431 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 RPL7P54-201ENST00000438336 674 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC016691.1-201ENST00000441321 413 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.12□□□□□ -1.91
ABCD3P28288 RPS15AP27-201ENST00000449183 343 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AL118520.1-201ENST00000450770 291 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 BTF3P15-201ENST00000455606 336 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 SNRPFP3-201ENST00000457792 225 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 RPL21P10-201ENST00000463521 490 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC008155.2-201ENST00000464337 397 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 AC113155.1-201ENST00000511141 769 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 Y_RNA.693-201ENST00000516641 110 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC107934.2-201ENST00000518653 310 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.12□□□□□ -1.91
ABCD3P28288 AC006199.1-201ENST00000548728 219 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC011611.1-201ENST00000552179 197 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 TGIF1P1-201ENST00000558095 802 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC005951.1-201ENST00000576706 485 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.12□□□□□ -1.91
ABCD3P28288 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 AC008739.2-201ENST00000597006 317 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC007621.1-201ENST00000604544 437 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AL035413.2-201ENST00000604801 525 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.12□□□□□ -1.91
ABCD3P28288 AC084757.4-201ENST00000616350 526 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 MIR6134-201ENST00000617606 109 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 MIR7975-201ENST00000619350 68 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 UCA1.1-201ENST00000620952 75 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC068792.1-201ENST00000621354 417 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 CR381653.2-201ENST00000624041 768 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 AC098679.4-201ENST00000624241 654 ntBASIC3.12□□□□□ -1.91
ABCD3P28288 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
ABCD3P28288 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ABCD3P28288 CDC27P3-201ENST00000635418 1910 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.11□□□□□ -1.91
ABCD3P28288 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ABCD3P28288 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ABCD3P28288 Y_RNA.255-201ENST00000364581 97 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 Y_RNA.409-201ENST00000383990 98 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 RNU6-1215P-201ENST00000384441 102 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 RNU6-903P-201ENST00000391270 109 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ABCD3P28288 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ABCD3P28288 BX323014.1-201ENST00000412876 237 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AC126124.2-201ENST00000413542 321 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 RPL21P90-201ENST00000415692 466 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.11□□□□□ -1.91
ABCD3P28288 AC009414.1-201ENST00000427200 443 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.11□□□□□ -1.91
ABCD3P28288 AC097713.2-201ENST00000430199 356 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AL360271.2-201ENST00000447710 161 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AC073415.1-201ENST00000449240 153 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 FDX1P2-201ENST00000450769 375 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 NIPA2P5-201ENST00000452282 464 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 PRSS3P4-201ENST00000453323 162 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AL583843.1-201ENST00000456070 346 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 RPS4XP2-201ENST00000458402 793 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.11□□□□□ -1.91
ABCD3P28288 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 RPL9P33-201ENST00000484311 566 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AC019235.1-201ENST00000503847 207 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AC009646.1-201ENST00000510455 318 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 RNU6-314P-201ENST00000516574 104 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.11□□□□□ -1.91
ABCD3P28288 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.11□□□□□ -1.91
ABCD3P28288 TRAV37-201ENST00000553906 342 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 HMGB1P33-201ENST00000563485 527 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AC087045.1-201ENST00000605856 382 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AC122108.2-201ENST00000611946 526 ntBASIC3.11□□□□□ -1.91
ABCD3P28288 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.11□□□□□ -1.91
ABCD3P28288 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.11□□□□□ -1.91
ABCD3P28288 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.11□□□□□ -1.91
ABCD3P28288 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.11□□□□□ -1.91
ABCD3P28288 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.11□□□□□ -1.91
ABCD3P28288 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms