Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC034114.1-201ENST00000520293 285 ntBASIC1.9□□□□□ -2.11
TPM1P09493 OR8K2P-201ENST00000524645 927 ntBASIC1.9□□□□□ -2.11
TPM1P09493 AC023538.1-201ENST00000534576 736 ntBASIC1.9□□□□□ -2.11
TPM1P09493 AC079598.5-201ENST00000547460 117 ntBASIC1.9□□□□□ -2.11
TPM1P09493 AC087897.1-201ENST00000550134 156 ntBASIC1.9□□□□□ -2.11
TPM1P09493 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.9□□□□□ -2.11
TPM1P09493 RNU4-82P-201ENST00000362443 140 ntBASIC1.89□□□□□ -2.11
TPM1P09493 SNORA8-201ENST00000384574 139 ntBASIC1.89□□□□□ -2.11
TPM1P09493 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.89□□□□□ -2.11
TPM1P09493 RSU1P2-202ENST00000437884 485 ntBASIC1.89□□□□□ -2.11
TPM1P09493 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.89□□□□□ -2.11
TPM1P09493 FAM103A2P-201ENST00000444122 354 ntBASIC1.89□□□□□ -2.11
TPM1P09493 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.89□□□□□ -2.11
TPM1P09493 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.89□□□□□ -2.11
TPM1P09493 RPL37P6-201ENST00000460682 294 ntBASIC1.89□□□□□ -2.11
TPM1P09493 AC010631.1-201ENST00000474150 156 ntBASIC1.89□□□□□ -2.11
TPM1P09493 AL049873.1-201ENST00000480540 376 ntBASIC1.89□□□□□ -2.11
TPM1P09493 AC093801.2-201ENST00000503966 1050 ntBASIC1.89□□□□□ -2.11
TPM1P09493 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.89□□□□□ -2.11
TPM1P09493 AC093809.1-201ENST00000509155 340 ntBASIC1.89□□□□□ -2.11
TPM1P09493 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.89□□□□□ -2.11
TPM1P09493 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.89□□□□□ -2.11
TPM1P09493 AC021171.1-201ENST00000603137 706 ntBASIC1.89□□□□□ -2.11
TPM1P09493 AC092953.2-201ENST00000608000 699 ntBASIC1.89□□□□□ -2.11
TPM1P09493 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.89□□□□□ -2.11
TPM1P09493 AC110994.2-201ENST00000635481 492 ntBASIC1.89□□□□□ -2.11
TPM1P09493 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TPM1P09493 RNA5SP363-201ENST00000365072 115 ntBASIC1.88□□□□□ -2.11
TPM1P09493 RNA5SP88-201ENST00000365560 109 ntBASIC1.88□□□□□ -2.11
TPM1P09493 Y_RNA.408-201ENST00000383987 102 ntBASIC1.88□□□□□ -2.11
TPM1P09493 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.88□□□□□ -2.11
TPM1P09493 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM1P09493 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.88□□□□□ -2.11
TPM1P09493 HSPE1P21-201ENST00000438283 308 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM1P09493 USP9YP15-201ENST00000442391 422 ntBASIC1.88□□□□□ -2.11
TPM1P09493 OR6C5P-201ENST00000452388 923 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AC140059.1-201ENST00000489238 361 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AC018868.1-201ENST00000491307 315 ntBASIC1.88□□□□□ -2.11
TPM1P09493 RN7SKP258-201ENST00000517151 304 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM1P09493 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM1P09493 AP005435.4-201ENST00000529514 284 ntBASIC1.88□□□□□ -2.11
TPM1P09493 RANP3-201ENST00000530970 276 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM1P09493 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM1P09493 AC104072.1-201ENST00000568817 668 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AC104581.2-201ENST00000572227 430 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AC026271.5-201ENST00000577873 130 ntBASIC1.88□□□□□ -2.11
TPM1P09493 BNIP3P22-201ENST00000593399 556 ntBASIC1.88□□□□□ -2.11
TPM1P09493 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.88□□□□□ -2.11
TPM1P09493 AL713866.2-201ENST00000603579 219 ntBASIC1.88□□□□□ -2.11
TPM1P09493 DPPA3P3-201ENST00000603842 430 ntBASIC1.88□□□□□ -2.11
TPM1P09493 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.88□□□□□ -2.11
TPM1P09493 AC064859.1-201ENST00000624741 174 ntBASIC1.88□□□□□ -2.11
TPM1P09493 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TPM1P09493 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
TPM1P09493 MTCO1P56-201ENST00000401674 224 ntBASIC1.87□□□□□ -2.11
TPM1P09493 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM1P09493 AL449283.1-202ENST00000418249 604 ntBASIC1.87□□□□□ -2.11
TPM1P09493 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TPM1P09493 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM1P09493 AL645568.3-201ENST00000433683 316 ntBASIC1.87□□□□□ -2.11
TPM1P09493 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM1P09493 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM1P09493 AC112771.1-201ENST00000463581 102 ntBASIC1.87□□□□□ -2.11
TPM1P09493 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.87□□□□□ -2.11
TPM1P09493 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.87□□□□□ -2.11
TPM1P09493 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.87□□□□□ -2.11
TPM1P09493 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.87□□□□□ -2.11
TPM1P09493 AC022880.1-201ENST00000534017 973 ntBASIC1.87□□□□□ -2.11
TPM1P09493 AC093012.1-202ENST00000549403 582 ntBASIC1.87□□□□□ -2.11
TPM1P09493 AC005776.1-201ENST00000603164 290 ntBASIC1.87□□□□□ -2.11
TPM1P09493 AC004987.4-201ENST00000603383 338 ntBASIC1.87□□□□□ -2.11
TPM1P09493 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
TPM1P09493 AL590808.1-201ENST00000618696 141 ntBASIC1.87□□□□□ -2.11
TPM1P09493 AC138627.2-201ENST00000624202 601 ntBASIC1.87□□□□□ -2.11
TPM1P09493 LINC02211-204ENST00000642024 1070 ntBASIC1.87□□□□□ -2.11
TPM1P09493 CDC27P3-201ENST00000635418 1910 ntBASIC1.86□□□□□ -2.11
TPM1P09493 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TPM1P09493 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TPM1P09493 RNU4-42P-201ENST00000364738 142 ntBASIC1.86□□□□□ -2.11
TPM1P09493 RNU6-744P-201ENST00000365557 107 ntBASIC1.86□□□□□ -2.11
TPM1P09493 RNU6-1316P-201ENST00000384242 108 ntBASIC1.86□□□□□ -2.11
TPM1P09493 RNU6-253P-201ENST00000384730 105 ntBASIC1.86□□□□□ -2.11
TPM1P09493 MIR1294-201ENST00000408503 142 ntBASIC1.86□□□□□ -2.11
TPM1P09493 RNA5SP508-201ENST00000411327 119 ntBASIC1.86□□□□□ -2.11
TPM1P09493 AC078974.1-201ENST00000411597 223 ntBASIC1.86□□□□□ -2.11
TPM1P09493 AC127391.1-201ENST00000411737 98 ntBASIC1.86□□□□□ -2.11
TPM1P09493 RPL21P24-201ENST00000413752 448 ntBASIC1.86□□□□□ -2.11
TPM1P09493 RPL23AP39-201ENST00000415533 405 ntBASIC1.86□□□□□ -2.11
TPM1P09493 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.86□□□□□ -2.11
TPM1P09493 RPS15AP9-201ENST00000439856 381 ntBASIC1.86□□□□□ -2.11
TPM1P09493 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM1P09493 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM1P09493 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM1P09493 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM1P09493 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.86□□□□□ -2.11
TPM1P09493 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms