Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL078603.1-201ENST00000603824 313 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 AL589743.7-201ENST00000612637 233 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 AL049641.1-201ENST00000441055 1948 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 SNORA18.2-201ENST00000383865 132 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 MIR532-201ENST00000385025 91 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 RN7SKP61-201ENST00000410642 295 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AC096649.2-201ENST00000416186 393 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AC005908.1-201ENST00000468701 347 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 UBL5P1-201ENST00000507979 193 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 RNU6-351P-201ENST00000516097 100 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 RNU7-40P-201ENST00000516397 64 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 FAM71BP1-201ENST00000604431 523 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AC080078.3-201ENST00000605407 463 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AC012676.2-201ENST00000619258 186 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 AL136313.1-201ENST00000624804 202 ntBASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
UBE2D4Q9Y2X8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 SNORD114-27-201ENST00000363766 70 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 RNU6-730P-201ENST00000383954 104 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 MIR518D-201ENST00000385014 87 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AP000275.1-201ENST00000411943 390 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AL449283.1-202ENST00000418249 604 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 SNRPGP9-201ENST00000456025 225 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AL133373.1-201ENST00000497098 94 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AC138853.1-201ENST00000503549 823 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AC103851.1-201ENST00000506833 274 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AC136932.1-201ENST00000574771 208 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AC138473.1-201ENST00000605717 526 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 BX322635.1-201ENST00000605804 496 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AL137246.1-201ENST00000607072 977 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AL121652.1-201ENST00000608851 448 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AC090772.4-201ENST00000623599 362 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AL133216.2-202ENST00000634512 349 ntBASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.57□□□□□ -2.32
UBE2D4Q9Y2X8 MTND5P30-201ENST00000452896 1731 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 Y_RNA.191-201ENST00000363972 113 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 RNU6-53P-201ENST00000365367 106 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC008850.1-201ENST00000427546 362 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC012497.1-201ENST00000429392 575 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC245047.4-201ENST00000433189 144 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AL049734.2-201ENST00000441066 616 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 PIGFP3-201ENST00000441918 722 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 TAF9P1-201ENST00000445421 515 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC245517.4-201ENST00000448601 281 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 TAF9P2-201ENST00000454958 515 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 RPS20P24-201ENST00000457473 361 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 RNU6-113P-201ENST00000516653 101 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 RNA5SP102-201ENST00000516865 106 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 CBX3P8-201ENST00000532412 525 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC021739.1-201ENST00000559631 174 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AL731537.2-201ENST00000561565 951 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 AC009974.1-201ENST00000608881 455 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.56□□□□□ -2.32
UBE2D4Q9Y2X8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 MIR515-2-201ENST00000384883 83 ntBASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 MIR515-1-201ENST00000384884 83 ntBASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 RNU2-36P-201ENST00000410361 191 ntBASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 UBE2V1P4-201ENST00000425374 344 ntBASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 AL590383.1-201ENST00000428602 75 ntBASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 AC004865.1-201ENST00000442276 1003 ntBASIC0.55□□□□□ -2.32
UBE2D4Q9Y2X8 AC067904.2-201ENST00000517322 1283 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms