Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNA5SP270-201ENST00000411361 118 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 RPL36AP53-201ENST00000432891 316 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 UBE2FP3-201ENST00000436366 524 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC016691.1-201ENST00000441321 413 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 ELOCP30-201ENST00000447108 299 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC007327.1-201ENST00000447461 264 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 ZNF886P-201ENST00000450781 723 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 USP9YP10-201ENST00000454868 628 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC068587.2-201ENST00000478386 781 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC108729.1-201ENST00000487812 947 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC109445.1-201ENST00000512356 383 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 RNU7-193P-201ENST00000516723 65 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 RNA5SP364-201ENST00000516938 78 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 RNU6-467P-201ENST00000517027 110 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 FAM92A1P1-201ENST00000528023 890 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC110588.1-201ENST00000559699 137 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 MIR3935-201ENST00000583472 104 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC005261.5-201ENST00000596280 355 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC091152.3-201ENST00000604227 325 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AL161798.1-201ENST00000604630 131 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC006270.3-201ENST00000605967 1036 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC092574.1-201ENST00000609771 420 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC245297.2-201ENST00000610119 565 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC009090.3-201ENST00000616553 565 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 U4atac.1-201ENST00000618345 95 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AP000676.3-201ENST00000623299 569 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 LINC02211-204ENST00000642024 1070 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 HSPA8P4-201ENST00000511877 1920 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 FAM133CP-201ENST00000332869 704 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 RNU6-658P-201ENST00000384606 106 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC019129.1-201ENST00000403786 261 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AL021407.1-201ENST00000404531 386 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 MIR1261-201ENST00000408659 82 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 EIF1AXP1-201ENST00000419267 435 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC093106.2-201ENST00000428212 385 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AL513124.1-201ENST00000450410 614 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC068781.1-201ENST00000488231 618 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC007182.2-201ENST00000489251 402 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 RPL22P13-201ENST00000493291 347 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 RNA5SP182-201ENST00000516064 82 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 RN7SKP258-201ENST00000517151 304 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 CYCSP26-201ENST00000534107 320 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AL133153.1-201ENST00000557756 303 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 ANP32BP3-201ENST00000559213 706 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC091057.3-201ENST00000602684 733 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC098826.3-201ENST00000603823 466 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC103710.2-201ENST00000609912 942 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC109809.1-201ENST00000619665 545 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 DUXAP9-208ENST00000622815 614 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC007490.1-201ENST00000624321 703 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AP003400.5-201ENST00000624827 617 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AC097655.1-201ENST00000635075 318 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 AP006437.1-201ENST00000641440 3685 ntBASIC1.67□□□□□ -2.14
ZIC4Q8N9L1 U8.13-201ENST00000390842 128 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 MTCO1P17-201ENST00000411522 491 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 USP9YP33-201ENST00000412220 421 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AL449283.1-202ENST00000418249 604 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 PTGES3P4-201ENST00000426243 356 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 USP9YP35-201ENST00000435696 412 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 PSPHP1-201ENST00000450062 261 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AL441985.1-201ENST00000457727 251 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AP000873.5-201ENST00000533906 236 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AL121821.2-201ENST00000556081 394 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms