Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LHX1P48742 AL133393.1-201ENST00000603277 287 ntBASIC2.9□□□□□ -1.95
LHX1P48742 NUTF2P8-201ENST00000604593 363 ntBASIC2.9□□□□□ -1.95
LHX1P48742 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.9□□□□□ -1.95
LHX1P48742 AL359693.1-201ENST00000614959 2407 ntBASIC2.9□□□□□ -1.95
LHX1P48742 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
LHX1P48742 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LHX1P48742 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.95
LHX1P48742 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LHX1P48742 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LHX1P48742 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LHX1P48742 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LHX1P48742 CD24P4-201ENST00000382840 243 ntBASIC2.89□□□□□ -1.95
LHX1P48742 RNU6-190P-201ENST00000384154 102 ntBASIC2.89□□□□□ -1.95
LHX1P48742 SAR1AP2-201ENST00000392696 594 ntBASIC2.89□□□□□ -1.95
LHX1P48742 DEFB108C-201ENST00000400154 252 ntBASIC2.89□□□□□ -1.95
LHX1P48742 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.89□□□□□ -1.95
LHX1P48742 RPS12P24-201ENST00000412619 387 ntBASIC2.89□□□□□ -1.95
LHX1P48742 NUP35P1-201ENST00000422734 947 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.89□□□□□ -1.95
LHX1P48742 ISCA1P1-201ENST00000426679 387 ntBASIC2.89□□□□□ -1.95
LHX1P48742 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.89□□□□□ -1.95
LHX1P48742 RPL36AP53-201ENST00000432891 316 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AL591212.2-201ENST00000433923 257 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC093392.2-201ENST00000450682 337 ntBASIC2.89□□□□□ -1.95
LHX1P48742 FABP5P13-201ENST00000452144 328 ntBASIC2.89□□□□□ -1.95
LHX1P48742 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.89□□□□□ -1.95
LHX1P48742 FABP5P15-201ENST00000453566 214 ntBASIC2.89□□□□□ -1.95
LHX1P48742 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LHX1P48742 AC105252.1-201ENST00000503089 286 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.89□□□□□ -1.95
LHX1P48742 AC117522.1-201ENST00000509821 380 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.89□□□□□ -1.95
LHX1P48742 RN7SKP282-201ENST00000516824 299 ntBASIC2.89□□□□□ -1.95
LHX1P48742 RNU6-143P-201ENST00000516942 93 ntBASIC2.89□□□□□ -1.95
LHX1P48742 RNA5SP165-201ENST00000517142 115 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC090572.1-201ENST00000519251 160 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.89□□□□□ -1.95
LHX1P48742 AC024909.2-201ENST00000553035 286 ntBASIC2.89□□□□□ -1.95
LHX1P48742 DNAJC8P1-201ENST00000554535 372 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.89□□□□□ -1.95
LHX1P48742 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.89□□□□□ -1.95
LHX1P48742 AC078899.3-201ENST00000599065 212 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC068790.2-201ENST00000602601 557 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC174048.1-201ENST00000603389 144 ntBASIC2.89□□□□□ -1.95
LHX1P48742 BNIP3P9-201ENST00000603714 553 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AL589743.7-201ENST00000612637 233 ntBASIC2.89□□□□□ -1.95
LHX1P48742 AC005332.10-201ENST00000612725 619 ntBASIC2.89□□□□□ -1.95
LHX1P48742 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LHX1P48742 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.89□□□□□ -1.95
LHX1P48742 AC092656.1-203ENST00000624134 423 ntBASIC2.89□□□□□ -1.95
LHX1P48742 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LHX1P48742 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
LHX1P48742 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.88□□□□□ -1.95
LHX1P48742 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LHX1P48742 Y_RNA.22-201ENST00000362492 102 ntBASIC2.88□□□□□ -1.95
LHX1P48742 RNU6-859P-201ENST00000362728 107 ntBASIC2.88□□□□□ -1.95
LHX1P48742 RNU6-799P-201ENST00000363567 107 ntBASIC2.88□□□□□ -1.95
LHX1P48742 SNORA51.4-201ENST00000364993 124 ntBASIC2.88□□□□□ -1.95
LHX1P48742 RNU6-1119P-201ENST00000384349 108 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AL512633.1-201ENST00000399931 655 ntBASIC2.88□□□□□ -1.95
LHX1P48742 MIR1289-1-201ENST00000408836 144 ntBASIC2.88□□□□□ -1.95
LHX1P48742 RNU2-68P-201ENST00000410878 191 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.88□□□□□ -1.95
LHX1P48742 AC093151.1-201ENST00000427711 313 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC133104.1-201ENST00000429100 218 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AL592045.1-201ENST00000429867 352 ntBASIC2.88□□□□□ -1.95
LHX1P48742 RPL23AP30-201ENST00000432419 501 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.88□□□□□ -1.95
LHX1P48742 GPR143P-201ENST00000434155 205 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC112220.1-201ENST00000434628 355 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
LHX1P48742 RPL36AP6-201ENST00000435770 321 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AL714022.1-201ENST00000439897 151 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.88□□□□□ -1.95
LHX1P48742 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC079448.1-201ENST00000449377 373 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.88□□□□□ -1.95
LHX1P48742 RNU6-410P-201ENST00000517006 107 ntBASIC2.88□□□□□ -1.95
LHX1P48742 SNORA31.26-201ENST00000517250 137 ntBASIC2.88□□□□□ -1.95
LHX1P48742 MTCO2P4-201ENST00000517968 247 ntBASIC2.88□□□□□ -1.95
LHX1P48742 OR5B19P-201ENST00000531766 928 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC007536.1-201ENST00000533382 349 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.88□□□□□ -1.95
LHX1P48742 AL391261.3-201ENST00000557194 520 ntBASIC2.88□□□□□ -1.95
LHX1P48742 MIR3162-201ENST00000581818 82 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC098848.2-201ENST00000588023 330 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC073648.5-201ENST00000603502 305 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC006023.1-201ENST00000603944 259 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC022893.3-201ENST00000607665 437 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC004852.3-201ENST00000614131 326 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC130324.3-201ENST00000614165 542 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC091834.1-201ENST00000614543 472 ntBASIC2.88□□□□□ -1.95
LHX1P48742 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.88□□□□□ -1.95
LHX1P48742 AC099842.1-201ENST00000619919 596 ntBASIC2.88□□□□□ -1.95
LHX1P48742 LRRC77P-213ENST00000637727 880 ntBASIC2.88□□□□□ -1.95
LHX1P48742 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.88□□□□□ -1.95
LHX1P48742 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LHX1P48742 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.88□□□□□ -1.95
LHX1P48742 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms