Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNORA19-201ENST00000384737 128 ntBASIC5.09□□□□□ -1.59
RXRBP28702 RNU6-33P-201ENST00000384793 107 ntBASIC5.09□□□□□ -1.59
RXRBP28702 SNORD70.1-201ENST00000391007 85 ntBASIC5.09□□□□□ -1.59
RXRBP28702 RNU2-38P-201ENST00000410856 79 ntBASIC5.09□□□□□ -1.59
RXRBP28702 RNU6-387P-201ENST00000411331 105 ntBASIC5.09□□□□□ -1.59
RXRBP28702 AC009901.1-201ENST00000506703 541 ntBASIC5.09□□□□□ -1.59
RXRBP28702 AC025465.3-201ENST00000510570 311 ntBASIC5.09□□□□□ -1.59
RXRBP28702 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.09□□□□□ -1.59
RXRBP28702 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.09□□□□□ -1.59
RXRBP28702 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.09□□□□□ -1.59
RXRBP28702 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.09□□□□□ -1.59
RXRBP28702 MIR3941-201ENST00000582572 103 ntBASIC5.09□□□□□ -1.59
RXRBP28702 Z98751.3-201ENST00000604447 521 ntBASIC5.09□□□□□ -1.59
RXRBP28702 AC006077.1-201ENST00000604746 343 ntBASIC5.09□□□□□ -1.59
RXRBP28702 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.09□□□□□ -1.59
RXRBP28702 AC009570.1-201ENST00000609599 745 ntBASIC5.09□□□□□ -1.59
RXRBP28702 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.09□□□□□ -1.59
RXRBP28702 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RXRBP28702 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RXRBP28702 ZNF826P-207ENST00000622273 1910 ntBASIC5.09□□□□□ -1.6
RXRBP28702 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
RXRBP28702 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.09□□□□□ -1.6
RXRBP28702 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RXRBP28702 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.08□□□□□ -1.6
RXRBP28702 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RXRBP28702 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RXRBP28702 EOGT-210ENST00000615922 1931 ntBASIC5.08□□□□□ -1.6
RXRBP28702 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RXRBP28702 Y_RNA.14-201ENST00000362415 103 ntBASIC5.08□□□□□ -1.6
RXRBP28702 Y_RNA.26-201ENST00000362539 101 ntBASIC5.08□□□□□ -1.6
RXRBP28702 RNA5SP374-201ENST00000362939 125 ntBASIC5.08□□□□□ -1.6
RXRBP28702 RNU6-842P-201ENST00000384269 107 ntBASIC5.08□□□□□ -1.6
RXRBP28702 RNU1-44P-201ENST00000384453 163 ntBASIC5.08□□□□□ -1.6
RXRBP28702 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RXRBP28702 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RXRBP28702 SNORA68.2-201ENST00000391263 128 ntBASIC5.08□□□□□ -1.6
RXRBP28702 MTATP6P29-201ENST00000415057 132 ntBASIC5.08□□□□□ -1.6
RXRBP28702 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.08□□□□□ -1.6
RXRBP28702 AC073910.1-201ENST00000445047 438 ntBASIC5.08□□□□□ -1.6
RXRBP28702 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.08□□□□□ -1.6
RXRBP28702 RPS23P3-201ENST00000470993 430 ntBASIC5.08□□□□□ -1.6
RXRBP28702 AC114801.2-201ENST00000503825 781 ntBASIC5.08□□□□□ -1.6
RXRBP28702 Y_RNA.715-201ENST00000517082 110 ntBASIC5.08□□□□□ -1.6
RXRBP28702 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RXRBP28702 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.08□□□□□ -1.6
RXRBP28702 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RXRBP28702 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RXRBP28702 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RXRBP28702 AL450326.2-201ENST00000421913 1962 ntBASIC5.07□□□□□ -1.6
RXRBP28702 AC087190.4-201ENST00000574616 8334 ntBASIC5.07□□□□□ -1.6
RXRBP28702 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RXRBP28702 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.07□□□□□ -1.6
RXRBP28702 MIR449A-201ENST00000362113 91 ntBASIC5.07□□□□□ -1.6
RXRBP28702 RNA5SP391-201ENST00000363456 119 ntBASIC5.07□□□□□ -1.6
RXRBP28702 Y_RNA.152-201ENST00000363578 100 ntBASIC5.07□□□□□ -1.6
RXRBP28702 RNU6-1243P-201ENST00000364028 107 ntBASIC5.07□□□□□ -1.6
RXRBP28702 Y_RNA.214-201ENST00000364201 112 ntBASIC5.07□□□□□ -1.6
RXRBP28702 SNORA41-201ENST00000384675 132 ntBASIC5.07□□□□□ -1.6
RXRBP28702 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.07□□□□□ -1.6
RXRBP28702 RPL31P2-201ENST00000413849 377 ntBASIC5.07□□□□□ -1.6
RXRBP28702 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.07□□□□□ -1.6
RXRBP28702 RPL23AP69-201ENST00000431134 458 ntBASIC5.07□□□□□ -1.6
RXRBP28702 RNU7-167P-201ENST00000459160 62 ntBASIC5.07□□□□□ -1.6
RXRBP28702 SNORD97-201ENST00000459187 142 ntBASIC5.07□□□□□ -1.6
RXRBP28702 FO393415.2-201ENST00000480085 343 ntBASIC5.07□□□□□ -1.6
RXRBP28702 DEFB109F-201ENST00000491870 277 ntBASIC5.07□□□□□ -1.6
RXRBP28702 PHBP14-201ENST00000512887 367 ntBASIC5.07□□□□□ -1.6
RXRBP28702 RNU6-138P-201ENST00000515952 107 ntBASIC5.07□□□□□ -1.6
RXRBP28702 RNA5SP164-201ENST00000516533 110 ntBASIC5.07□□□□□ -1.6
RXRBP28702 AC087369.1-201ENST00000520775 996 ntBASIC5.07□□□□□ -1.6
RXRBP28702 IGHV3-76-201ENST00000522465 295 ntBASIC5.07□□□□□ -1.6
RXRBP28702 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.07□□□□□ -1.6
RXRBP28702 AC022080.3-201ENST00000544433 482 ntBASIC5.07□□□□□ -1.6
RXRBP28702 AC093591.2-201ENST00000565254 3843 ntBASIC5.07□□□□□ -1.6
RXRBP28702 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.07□□□□□ -1.6
RXRBP28702 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.07□□□□□ -1.6
RXRBP28702 AL161423.1-201ENST00000613700 262 ntBASIC5.07□□□□□ -1.6
RXRBP28702 AL162274.2-201ENST00000614406 332 ntBASIC5.07□□□□□ -1.6
RXRBP28702 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RXRBP28702 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.07□□□□□ -1.6
RXRBP28702 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.07□□□□□ -1.6
RXRBP28702 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.07□□□□□ -1.6
RXRBP28702 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RXRBP28702 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RXRBP28702 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RXRBP28702 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RXRBP28702 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
RXRBP28702 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RXRBP28702 SNORD62.1-201ENST00000362541 86 ntBASIC5.06□□□□□ -1.6
RXRBP28702 Y_RNA.39-201ENST00000362620 98 ntBASIC5.06□□□□□ -1.6
RXRBP28702 Y_RNA.376-201ENST00000365638 108 ntBASIC5.06□□□□□ -1.6
RXRBP28702 Y_RNA.424-201ENST00000384063 103 ntBASIC5.06□□□□□ -1.6
RXRBP28702 Y_RNA.518-201ENST00000384552 113 ntBASIC5.06□□□□□ -1.6
RXRBP28702 AC110754.1-201ENST00000399740 601 ntBASIC5.06□□□□□ -1.6
RXRBP28702 AL592291.1-201ENST00000403830 352 ntBASIC5.06□□□□□ -1.6
RXRBP28702 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.06□□□□□ -1.6
RXRBP28702 MRPS18BP2-201ENST00000434310 759 ntBASIC5.06□□□□□ -1.6
RXRBP28702 RPS17P13-201ENST00000448974 407 ntBASIC5.06□□□□□ -1.6
RXRBP28702 RBMY2UP-201ENST00000453474 324 ntBASIC5.06□□□□□ -1.6
RXRBP28702 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 372.9 ms