Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNRPGP17-201ENST00000603780 214 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AP005229.2-201ENST00000609980 697 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AC108479.2-201ENST00000617314 601 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 Y_RNA.245-201ENST00000364493 95 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 RNU6-338P-201ENST00000383888 105 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 RNU6-883P-201ENST00000384597 107 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 RNA5SP465-201ENST00000391195 109 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 RPL22P22-201ENST00000395439 379 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AC127391.1-201ENST00000411737 98 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AL158050.1-201ENST00000416077 457 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AL358453.1-201ENST00000422522 250 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 MTCYBP32-201ENST00000427945 1084 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 COX6CP18-201ENST00000448769 222 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AL137159.1-201ENST00000452808 512 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 KATNBL1P6-201ENST00000453433 915 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 MTND1P9-201ENST00000453775 944 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.12□□□□□ -2.23
CXCL1P09341 AC104564.1-201ENST00000493028 407 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AC069306.1-201ENST00000507006 843 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.12□□□□□ -2.23
CXCL1P09341 RNU6-703P-201ENST00000516946 107 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 SNORA76.2-201ENST00000517095 137 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
CXCL1P09341 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.12□□□□□ -2.23
CXCL1P09341 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.12□□□□□ -2.23
CXCL1P09341 MTCO2P15-201ENST00000532655 656 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 KATNBL1P5-201ENST00000605015 517 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AC016925.2-201ENST00000605108 242 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AL390208.1-201ENST00000605885 644 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AL359314.1-201ENST00000616913 261 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AL109620.1-201ENST00000618738 1197 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AC084824.4-201ENST00000620106 731 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AC010149.2-201ENST00000637608 315 ntBASIC1.12□□□□□ -2.23
CXCL1P09341 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.11□□□□□ -2.23
CXCL1P09341 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CXCL1P09341 RNU6-1300P-201ENST00000391046 108 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 MIR1283-2-201ENST00000408621 87 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 TAF13P2-201ENST00000416876 286 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.11□□□□□ -2.23
CXCL1P09341 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CXCL1P09341 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.11□□□□□ -2.23
CXCL1P09341 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.11□□□□□ -2.23
CXCL1P09341 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.11□□□□□ -2.23
CXCL1P09341 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.11□□□□□ -2.23
CXCL1P09341 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.11□□□□□ -2.23
CXCL1P09341 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.11□□□□□ -2.23
CXCL1P09341 AL049873.1-201ENST00000480540 376 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 RPL36AP48-201ENST00000485521 314 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 TMEM251P1-201ENST00000503717 318 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 AC114801.2-201ENST00000503825 781 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 AC093801.2-201ENST00000503966 1050 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 AC021146.2-201ENST00000504736 556 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 FAM206BP-201ENST00000510179 541 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 AC010486.1-201ENST00000511793 424 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 RNU6-927P-201ENST00000516199 100 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 RNU6-1261P-201ENST00000517194 104 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 DUXAP5-201ENST00000529668 529 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.11□□□□□ -2.23
CXCL1P09341 IMMP1LP2-201ENST00000552954 492 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.11□□□□□ -2.23
CXCL1P09341 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.11□□□□□ -2.23
CXCL1P09341 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.11□□□□□ -2.23
CXCL1P09341 AL161722.3-201ENST00000605789 2983 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 AL050343.2-201ENST00000607338 280 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 AC093673.2-201ENST00000609674 331 ntBASIC1.11□□□□□ -2.23
CXCL1P09341 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
CXCL1P09341 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
CXCL1P09341 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
CXCL1P09341 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.11□□□□□ -2.23
CXCL1P09341 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
CXCL1P09341 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CXCL1P09341 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.1□□□□□ -2.23
CXCL1P09341 SNRPEP3-201ENST00000338402 276 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 RNU6-28P-201ENST00000362378 107 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 Y_RNA.234-201ENST00000364409 97 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 RNU6-1078P-201ENST00000364522 103 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 MIR30A-201ENST00000385092 71 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 MIR29C-201ENST00000385231 88 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 RNU6-754P-201ENST00000391166 107 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 UBE2V1P2-201ENST00000397758 440 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 MIR1302-8-201ENST00000408342 128 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 RNU2-68P-201ENST00000410878 191 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 RNU2-41P-201ENST00000410991 178 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 RNA5SP508-201ENST00000411327 119 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.1□□□□□ -2.23
CXCL1P09341 UBE2V1P4-201ENST00000425374 344 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 MTND4LP7-201ENST00000431728 294 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 USP9YP24-201ENST00000434374 697 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AP000949.1-201ENST00000438328 629 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 HMGB1P18-201ENST00000438801 619 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.1□□□□□ -2.23
CXCL1P09341 CECR9-201ENST00000453421 199 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AL441985.1-201ENST00000457727 251 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.1□□□□□ -2.23
CXCL1P09341 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.1□□□□□ -2.23
CXCL1P09341 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.1□□□□□ -2.23
CXCL1P09341 AL121821.2-201ENST00000556081 394 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms