Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBFD1O14562 AL163540.1-201ENST00000485382 386 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 RPS27AP10-201ENST00000496103 208 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.59□□□□□ -2.15
UBFD1O14562 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
UBFD1O14562 AC008628.1-201ENST00000508663 265 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC023141.11-201ENST00000508864 202 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.59□□□□□ -2.15
UBFD1O14562 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBFD1O14562 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.59□□□□□ -2.15
UBFD1O14562 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.59□□□□□ -2.15
UBFD1O14562 AC084851.1-201ENST00000529105 249 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
UBFD1O14562 AL359212.1-201ENST00000556608 614 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC008507.2-201ENST00000588402 1176 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC069545.1-201ENST00000605671 358 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC007349.4-201ENST00000608114 532 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC010133.1-201ENST00000615809 842 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AL357080.1-201ENST00000617394 239 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC109454.4-201ENST00000623411 649 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
UBFD1O14562 SNORA63.3-201ENST00000362682 132 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 RNU6-1122P-201ENST00000384449 107 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 MIR888-201ENST00000401186 77 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 MIR1287-201ENST00000408492 90 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 POLHP1-201ENST00000411806 470 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 USP9YP21-201ENST00000420603 432 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 MRPS36P1-201ENST00000421291 307 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.58□□□□□ -2.16
UBFD1O14562 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.58□□□□□ -2.16
UBFD1O14562 MTND5P14-201ENST00000441481 1267 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC069528.1-202ENST00000482888 637 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC092902.1-201ENST00000486999 259 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.58□□□□□ -2.16
UBFD1O14562 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
UBFD1O14562 AP005902.1-201ENST00000521358 186 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 OR6C7P-201ENST00000547875 934 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.58□□□□□ -2.16
UBFD1O14562 MIR3199-1-201ENST00000582434 88 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC010928.2-201ENST00000588017 287 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC002545.1-201ENST00000592511 181 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC005261.5-201ENST00000596280 355 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 VN1R80P-201ENST00000597126 338 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 BBIP1P1-201ENST00000602999 279 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC021749.1-201ENST00000604322 607 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AL450336.1-201ENST00000605180 586 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AP002802.2-201ENST00000605877 235 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AL138478.1-201ENST00000612252 832 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AL161423.1-201ENST00000613700 262 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC010678.1-201ENST00000614118 713 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AL512427.1-201ENST00000618593 349 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC104985.3-201ENST00000623479 597 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 AC019226.1-201ENST00000625666 515 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC010889.1-201ENST00000566193 2666 ntBASIC1.58□□□□□ -2.16
UBFD1O14562 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.58□□□□□ -2.16
UBFD1O14562 AC103710.2-202ENST00000641454 2853 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBFD1O14562 UBE2L2-201ENST00000254302 429 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 RNU6-97P-201ENST00000363387 104 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 RNA5SP125-201ENST00000364843 120 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 RNU6-359P-201ENST00000365466 108 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UBFD1O14562 RPS20P15-201ENST00000412792 311 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 SNORD56-201ENST00000413522 71 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.57□□□□□ -2.16
UBFD1O14562 MED14P1-201ENST00000430517 648 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 MTATP6P30-201ENST00000443540 664 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.57□□□□□ -2.16
UBFD1O14562 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.57□□□□□ -2.16
UBFD1O14562 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.57□□□□□ -2.16
UBFD1O14562 LTV1P1-201ENST00000510683 1237 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AC117532.1-201ENST00000514638 323 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 RNA5SP291-201ENST00000517222 105 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.57□□□□□ -2.16
UBFD1O14562 MTCO2P15-201ENST00000532655 656 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AC010186.2-204ENST00000537668 439 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.57□□□□□ -2.16
UBFD1O14562 MIR5571-201ENST00000577998 113 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AC126365.2-201ENST00000580630 379 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UBFD1O14562 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.57□□□□□ -2.16
UBFD1O14562 AL158211.2-201ENST00000607282 395 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AC004908.2-201ENST00000609090 574 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AC107075.1-201ENST00000613695 314 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 AL449363.1-201ENST00000617815 186 ntBASIC1.57□□□□□ -2.16
UBFD1O14562 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.57□□□□□ -2.16
UBFD1O14562 AC007490.1-201ENST00000624321 703 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms