Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RN7SKP32-201ENST00000410167 303 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC016691.1-201ENST00000441321 413 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 ELOCP30-201ENST00000447108 299 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 MRPS33P3-201ENST00000513456 322 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC092451.2-201ENST00000538746 658 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AL512310.1-201ENST00000548639 172 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AL133153.1-201ENST00000557756 303 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 BNIP3P19-201ENST00000605397 577 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U4atac.1-201ENST00000618345 95 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AC024581.2-201ENST00000619986 252 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AP003476.1-201ENST00000623984 516 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
VAPAQ9P0L0 AL354685.2-201ENST00000448218 1447 ntBASIC1.83□□□□□ -2.12
VAPAQ9P0L0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 UBE2L2-201ENST00000254302 429 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL021407.1-201ENST00000404531 386 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 ZNF90P2-204ENST00000419323 1075 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL356320.1-201ENST00000429616 163 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 ZNF886P-201ENST00000450781 723 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 FABP5P15-201ENST00000453566 214 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL049873.1-201ENST00000480540 376 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AC139453.3-201ENST00000493276 369 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 RNU6-581P-201ENST00000516214 105 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 RNU2-19P-201ENST00000517288 84 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 MTND4LP25-201ENST00000570218 163 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 MIR3126-201ENST00000577443 74 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AC091057.3-201ENST00000602684 733 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AL133445.2-201ENST00000611191 527 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AC097655.1-201ENST00000635075 318 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AC131280.1-202ENST00000624067 4211 ntBASIC1.82□□□□□ -2.12
VAPAQ9P0L0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.82□□□□□ -2.12
VAPAQ9P0L0 RNU2-63P-201ENST00000410792 194 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AL449283.1-202ENST00000418249 604 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AL139413.1-201ENST00000421309 217 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 OR6C5P-201ENST00000452388 923 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 RPL22P13-201ENST00000493291 347 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 CKS1BP2-201ENST00000497342 240 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 RNU6-703P-201ENST00000516946 107 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 RN7SKP258-201ENST00000517151 304 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AC087276.1-201ENST00000529659 480 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AC090079.2-201ENST00000575289 768 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 MIR4672-201ENST00000583126 81 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AC009233.1-201ENST00000616477 371 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 AP000676.3-201ENST00000623299 569 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms