Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AL031601.2-202ENST00000622650 282 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 AL512643.1-201ENST00000635735 524 ntBASIC3.62□□□□□ -1.83
VSX1Q9NZR4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
VSX1Q9NZR4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 MIR383-201ENST00000362257 73 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 SNORD35B-201ENST00000363660 87 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 RNU6-266P-201ENST00000364225 107 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 RNU6-741P-201ENST00000383889 107 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 Y_RNA.445-201ENST00000384168 102 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 RNU2-37P-201ENST00000410695 177 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 DNAJC19P7-201ENST00000428811 344 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 NIPA2P5-201ENST00000452282 464 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC006463.2-201ENST00000473326 348 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 RN7SL604P-201ENST00000492589 296 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC093840.1-201ENST00000511599 336 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC093303.1-201ENST00000514549 295 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 RNU6-1332P-201ENST00000516666 104 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 RNU6-307P-201ENST00000516743 106 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AL157871.3-201ENST00000557231 293 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 ZNF192P1-203ENST00000565888 810 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC025627.2-201ENST00000576220 160 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 AL355802.3-201ENST00000607571 545 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 MIR8059-201ENST00000620427 81 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 MIR6758-201ENST00000620653 63 ntBASIC3.61□□□□□ -1.83
VSX1Q9NZR4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
VSX1Q9NZR4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 MIR1251-201ENST00000408552 70 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 Y_RNA.625-201ENST00000411256 107 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 RPS15AP6-201ENST00000420703 385 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 RPL21P66-201ENST00000426566 466 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AL592045.1-201ENST00000429867 352 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 GPM6BP2-201ENST00000432046 144 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 ATP5HP2-201ENST00000433885 485 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 RPS24P13-201ENST00000442520 397 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 GPM6BP1-201ENST00000446387 144 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 NDUFB1P2-201ENST00000449477 176 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 UQCRHP4-201ENST00000471686 272 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AC117503.1-201ENST00000472241 394 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 RPS23P1-201ENST00000491662 432 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 RNU6-976P-201ENST00000516086 111 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 RNU6-327P-201ENST00000516270 127 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 Y_RNA.708-201ENST00000516950 96 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 Y_RNA.711-201ENST00000516993 102 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 SNRPGP18-201ENST00000553000 214 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 MIR3138-201ENST00000585238 82 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AP000787.2-201ENST00000604432 568 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AL162730.1-201ENST00000605734 292 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AC006023.2-201ENST00000609916 167 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AC005344.1-201ENST00000613391 459 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 RMST_4.1-201ENST00000616886 107 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 U7.8-201ENST00000619968 63 ntBASIC3.6□□□□□ -1.83
VSX1Q9NZR4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.6□□□□□ -1.83
VSX1Q9NZR4 Z99571.1-201ENST00000636677 394 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms