Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU6-1300P-201ENST00000391046 108 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC42Q96M95 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC42Q96M95 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC42Q96M95 HMGN2P10-201ENST00000448085 265 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 RNU1-98P-201ENST00000458992 160 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 HMGB1P35-201ENST00000503360 598 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 TMEM251P1-201ENST00000503717 318 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 RNU1-41P-201ENST00000516161 162 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 RNU1-48P-201ENST00000516400 162 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC42Q96M95 AC006199.1-201ENST00000548728 219 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 ZNF971P-201ENST00000562068 1249 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 AL354943.1-201ENST00000572103 781 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC42Q96M95 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC42Q96M95 AC011494.1-201ENST00000596454 237 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 AC104763.2-201ENST00000604179 382 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 AL390208.1-201ENST00000605885 644 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC42Q96M95 AC107075.1-201ENST00000613695 314 ntBASIC1.58□□□□□ -2.16
CCDC42Q96M95 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC42Q96M95 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC42Q96M95 RNU1-72P-201ENST00000362976 153 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 SNORA8-201ENST00000384574 139 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 RNU6-19P-201ENST00000384718 107 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 CISD1P1-201ENST00000393907 327 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 OR9R1P-201ENST00000412200 877 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 AC007435.1-201ENST00000421086 415 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 MTCO2P5-201ENST00000422621 426 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 AL161651.1-201ENST00000440882 223 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 AC244505.3-201ENST00000454598 187 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 AC027575.1-201ENST00000481064 460 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 AC092902.1-201ENST00000486999 259 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 RNA5SP290-201ENST00000517133 127 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 RNU6-1261P-201ENST00000517194 104 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 EEF1A1P37-201ENST00000522748 715 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 AP004607.1-201ENST00000524456 203 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC42Q96M95 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 MIR3167-201ENST00000579623 85 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC42Q96M95 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 LINC02211-204ENST00000642024 1070 ntBASIC1.57□□□□□ -2.16
CCDC42Q96M95 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
CCDC42Q96M95 CDC27P3-201ENST00000635418 1910 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 SNRPEP3-201ENST00000338402 276 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 RNU6-792P-201ENST00000363490 107 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 RNU6-637P-201ENST00000384050 107 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 MIR518A2-201ENST00000384966 87 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 SNORA40.19-201ENST00000390846 128 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 BTF3P8-201ENST00000414577 526 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 VN1R36P-201ENST00000414936 291 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC42Q96M95 AL513185.2-201ENST00000425543 193 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 ELOCP14-201ENST00000428070 331 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 VN1R108P-201ENST00000431580 830 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 AC092427.1-201ENST00000439177 601 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 PTGES3P1-201ENST00000439531 483 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 ELOCP7-201ENST00000439968 331 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC42Q96M95 AL357134.1-201ENST00000445848 426 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 CYP2C59P-201ENST00000457790 269 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 AP001324.2-201ENST00000461163 319 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 AC117503.1-201ENST00000472241 394 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC42Q96M95 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 RPL22P13-201ENST00000493291 347 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 SMURF2P1-201ENST00000514992 481 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 AC006518.2-201ENST00000542513 940 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC42Q96M95 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC42Q96M95 ROCK1P1-201ENST00000573767 549 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC42Q96M95 MTCYBP22-201ENST00000603788 447 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 AC010133.1-201ENST00000615809 842 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC42Q96M95 MIR1322-201ENST00000638013 71 ntBASIC1.56□□□□□ -2.16
CCDC42Q96M95 RNU6-28P-201ENST00000362378 107 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 RNU6-650P-201ENST00000365658 111 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 MIR95-201ENST00000385072 81 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 DHFRP6-201ENST00000401776 268 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 AL033519.2-201ENST00000403958 392 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC42Q96M95 AC074117.2-201ENST00000417130 397 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 AL139421.1-201ENST00000423010 169 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 ZFAND6P1-201ENST00000434138 605 ntBASIC1.55□□□□□ -2.16
CCDC42Q96M95 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms