Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 RNU7-23P-201ENST00000459465 62 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.82□□□□□ -1.8
TIFAQ96CG3 RBBP4P6-201ENST00000508098 202 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 AC104136.1-201ENST00000512969 394 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 RNU6-1281P-201ENST00000516223 105 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 RNU6-928P-201ENST00000516876 104 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 AP005435.4-201ENST00000529514 284 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 AP000867.2-201ENST00000532468 320 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.82□□□□□ -1.8
TIFAQ96CG3 NACAP3-201ENST00000552100 481 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.82□□□□□ -1.8
TIFAQ96CG3 MIR5692A1-201ENST00000580523 69 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 MIR3941-201ENST00000582572 103 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.82□□□□□ -1.8
TIFAQ96CG3 AL670379.4-201ENST00000605279 254 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 U4.6-201ENST00000621618 127 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 MIR4727-201ENST00000622232 55 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.82□□□□□ -1.8
TIFAQ96CG3 GABRG2-229ENST00000641017 3628 ntBASIC3.82□□□□□ -1.8
TIFAQ96CG3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TIFAQ96CG3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TIFAQ96CG3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TIFAQ96CG3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TIFAQ96CG3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 ELF2P3-201ENST00000445099 1506 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TIFAQ96CG3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TIFAQ96CG3 HLFP1-201ENST00000402375 499 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 USP9YP27-201ENST00000418455 438 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 CALM1P1-201ENST00000442082 433 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 Z99127.3-201ENST00000448158 395 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 SNRPFP3-201ENST00000457792 225 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 U3.44-201ENST00000458938 192 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 RPS26P15-201ENST00000488067 348 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 AC069499.1-201ENST00000489433 509 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 AC011352.1-201ENST00000512300 793 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 RNU6-835P-201ENST00000516974 104 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TIFAQ96CG3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TIFAQ96CG3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 MIR4644-201ENST00000579929 84 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 MIR548AC-201ENST00000585049 88 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 U2.21-201ENST00000637295 81 ntBASIC3.81□□□□□ -1.8
TIFAQ96CG3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.81□□□□□ -1.8
TIFAQ96CG3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TIFAQ96CG3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 RNU6-552P-201ENST00000362869 119 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 SNORA4.3-201ENST00000365564 137 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TIFAQ96CG3 SNORA69-201ENST00000383895 132 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 RNU6-903P-201ENST00000391270 109 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC068050.1-201ENST00000394891 380 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC000111.3-201ENST00000433478 193 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 MTATP6P13-201ENST00000438531 667 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TIFAQ96CG3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 AL162395.1-201ENST00000457882 422 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 SUMO2P6-201ENST00000505273 288 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC092436.1-201ENST00000506450 503 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC090877.1-201ENST00000561418 344 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 BNIP3P30-201ENST00000601184 574 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AL139395.1-201ENST00000603662 160 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AC024940.5-201ENST00000622889 474 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AP003122.6-201ENST00000623831 495 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 AL359757.2-201ENST00000624309 274 ntBASIC3.8□□□□□ -1.8
TIFAQ96CG3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TIFAQ96CG3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TIFAQ96CG3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TIFAQ96CG3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TIFAQ96CG3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TIFAQ96CG3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.8□□□□□ -1.8
TIFAQ96CG3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TIFAQ96CG3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.79□□□□□ -1.8
TIFAQ96CG3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.79□□□□□ -1.8
TIFAQ96CG3 RNU4-12P-201ENST00000365233 139 ntBASIC3.79□□□□□ -1.8
TIFAQ96CG3 Y_RNA.554-201ENST00000384672 102 ntBASIC3.79□□□□□ -1.8
TIFAQ96CG3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms