Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNA5SP384-201ENST00000516615 116 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 RNU7-143P-201ENST00000516781 65 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLRN1P58418 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.65□□□□□ -1.83
CLRN1P58418 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.65□□□□□ -1.83
CLRN1P58418 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.65□□□□□ -1.83
CLRN1P58418 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.65□□□□□ -1.83
CLRN1P58418 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.65□□□□□ -1.83
CLRN1P58418 AC025627.2-201ENST00000576220 160 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC007938.3-201ENST00000604965 623 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC123912.5-201ENST00000605470 343 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC012603.1-201ENST00000606424 528 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 AC008121.3-201ENST00000618726 433 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.65□□□□□ -1.83
CLRN1P58418 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.65□□□□□ -1.83
CLRN1P58418 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.65□□□□□ -1.83
CLRN1P58418 MARK2P15-201ENST00000432204 2186 ntBASIC3.65□□□□□ -1.83
CLRN1P58418 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLRN1P58418 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.64□□□□□ -1.83
CLRN1P58418 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLRN1P58418 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLRN1P58418 RNU6-600P-201ENST00000362524 99 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 RNU6-384P-201ENST00000364900 104 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 MIR517A-201ENST00000385001 87 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AL592148.1-201ENST00000413568 445 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.64□□□□□ -1.83
CLRN1P58418 MCFD2P1-201ENST00000417812 300 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.64□□□□□ -1.83
CLRN1P58418 USMG5P1-201ENST00000425964 177 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.64□□□□□ -1.83
CLRN1P58418 MYL8P-204ENST00000431574 518 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AL160004.2-201ENST00000432935 350 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.64□□□□□ -1.83
CLRN1P58418 AL645939.1-201ENST00000453429 797 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 RPS23P3-201ENST00000470993 430 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AC018437.1-201ENST00000492214 406 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.64□□□□□ -1.83
CLRN1P58418 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.64□□□□□ -1.83
CLRN1P58418 RNU6-470P-201ENST00000515954 104 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 Y_RNA.661-201ENST00000516003 99 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 RNU6-1046P-201ENST00000516538 107 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 RNU6-1137P-201ENST00000517073 99 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 IGKV2-38-201ENST00000517443 247 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AC090281.1-201ENST00000523019 276 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.64□□□□□ -1.83
CLRN1P58418 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.64□□□□□ -1.83
CLRN1P58418 AC023575.1-201ENST00000580510 358 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 MIR5684-201ENST00000585074 65 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.64□□□□□ -1.83
CLRN1P58418 AC083806.3-201ENST00000614016 455 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 MIR8059-201ENST00000620427 81 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 NCAPGP1-201ENST00000505112 1814 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 ZNF962P-201ENST00000443465 3140 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.64□□□□□ -1.83
CLRN1P58418 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLRN1P58418 AC008568.2-201ENST00000623862 2313 ntBASIC3.64□□□□□ -1.83
CLRN1P58418 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.64□□□□□ -1.83
CLRN1P58418 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CLRN1P58418 MIR412-201ENST00000362142 91 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 RNU6-741P-201ENST00000383889 107 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 RNU6-842P-201ENST00000384269 107 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 SNORA37-201ENST00000384504 129 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 MIR93-201ENST00000385024 80 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 MIR607-201ENST00000385241 96 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 MIR1251-201ENST00000408552 70 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 FAR2P2-201ENST00000413041 594 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.63□□□□□ -1.83
CLRN1P58418 AL590383.1-201ENST00000428602 75 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 MTND3P2-201ENST00000438452 342 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLRN1P58418 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.63□□□□□ -1.83
CLRN1P58418 FTH1P25-201ENST00000447665 469 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.63□□□□□ -1.83
CLRN1P58418 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.63□□□□□ -1.83
CLRN1P58418 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
CLRN1P58418 AC139453.3-201ENST00000493276 369 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 RNU6-120P-201ENST00000516077 103 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 SNORA31.9-201ENST00000516429 84 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 RNA5SP291-201ENST00000517222 105 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AC009902.1-201ENST00000519351 183 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.63□□□□□ -1.83
CLRN1P58418 AC091516.1-201ENST00000549191 703 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.63□□□□□ -1.83
CLRN1P58418 BNIP3P16-201ENST00000589779 534 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.63□□□□□ -1.83
CLRN1P58418 AL160281.1-201ENST00000605307 311 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AC015813.4-201ENST00000610469 179 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AC007485.1-201ENST00000616755 206 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AL591424.2-201ENST00000617023 128 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 AC091925.1-201ENST00000623204 462 ntBASIC3.63□□□□□ -1.83
CLRN1P58418 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.63□□□□□ -1.83
CLRN1P58418 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.63□□□□□ -1.83
CLRN1P58418 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.63□□□□□ -1.83
CLRN1P58418 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.63□□□□□ -1.83
CLRN1P58418 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLRN1P58418 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.62□□□□□ -1.83
CLRN1P58418 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
CLRN1P58418 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.62□□□□□ -1.83
CLRN1P58418 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms