Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC009310.1-201ENST00000414414 451 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 MTCYBP38-201ENST00000417160 1123 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 AL590233.1-201ENST00000430017 456 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 AC015922.2-201ENST00000435593 184 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.06□□□□□ -2.24
FOXA3P55318 VN1R10P-201ENST00000447106 875 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.06□□□□□ -2.24
FOXA3P55318 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.06□□□□□ -2.24
FOXA3P55318 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.06□□□□□ -2.24
FOXA3P55318 AC098862.1-201ENST00000504991 413 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 AC119751.5-201ENST00000514077 770 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.06□□□□□ -2.24
FOXA3P55318 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.06□□□□□ -2.24
FOXA3P55318 AC021739.1-201ENST00000559631 174 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 MIR3167-201ENST00000579623 85 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.06□□□□□ -2.24
FOXA3P55318 AC099842.1-201ENST00000619919 596 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 MIR7843-201ENST00000622274 79 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 U6.101-201ENST00000637707 76 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 Z75746.1-201ENST00000440243 2080 ntBASIC1.06□□□□□ -2.24
FOXA3P55318 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.05□□□□□ -2.24
FOXA3P55318 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 ZNF29P-201ENST00000225587 168 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 RNU6-839P-201ENST00000363347 108 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 BTF3L4P2-201ENST00000392798 346 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
FOXA3P55318 RPL30P13-201ENST00000418873 348 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 RPL7P34-201ENST00000433316 712 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AL121601.2-201ENST00000438019 707 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 PTGES3P1-201ENST00000439531 483 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.05□□□□□ -2.24
FOXA3P55318 MOB1AP2-201ENST00000446060 614 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.05□□□□□ -2.24
FOXA3P55318 HMGN2P10-201ENST00000448085 265 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AL137159.1-201ENST00000452808 512 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AC244505.3-201ENST00000454598 187 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.05□□□□□ -2.24
FOXA3P55318 AC013828.1-201ENST00000481845 158 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AL160314.1-201ENST00000490836 438 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 RPS29P21-201ENST00000496272 170 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AC103833.1-201ENST00000517442 172 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.05□□□□□ -2.24
FOXA3P55318 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.05□□□□□ -2.24
FOXA3P55318 NDUFA5P6-201ENST00000542110 379 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AC091544.4-201ENST00000555268 342 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AC023825.1-201ENST00000566704 1030 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AC133794.1-201ENST00000602731 914 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 DUSP12P1-201ENST00000612874 516 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 RMST_10.1-201ENST00000616309 154 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 AC106730.3-201ENST00000624568 641 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.05□□□□□ -2.24
FOXA3P55318 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
FOXA3P55318 SNORD56.4-201ENST00000363883 71 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
FOXA3P55318 Y_RNA.500-201ENST00000384466 111 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.04□□□□□ -2.24
FOXA3P55318 AC244453.4-201ENST00000419150 388 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC246680.2-201ENST00000422106 389 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AL354695.1-201ENST00000427935 228 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC244035.1-201ENST00000430042 390 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC002381.1-201ENST00000447049 280 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXA3P55318 HMGN2P23-201ENST00000456759 269 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC018868.1-201ENST00000491307 315 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.04□□□□□ -2.24
FOXA3P55318 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXA3P55318 RNA5SP165-201ENST00000517142 115 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXA3P55318 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
FOXA3P55318 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXA3P55318 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXA3P55318 YWHAZP1-201ENST00000556286 722 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.04□□□□□ -2.24
FOXA3P55318 ROCK1P1-201ENST00000573767 549 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.04□□□□□ -2.24
FOXA3P55318 BNIP3P23-201ENST00000599655 511 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 SNRPGP17-201ENST00000603780 214 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC011451.2-201ENST00000604303 598 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC018638.7-201ENST00000605836 1114 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AF129408.1-201ENST00000608767 431 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC011939.3-201ENST00000613686 466 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 MIR1264-201ENST00000616374 69 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AL596245.1-201ENST00000618994 362 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 AC132825.7-201ENST00000638744 335 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 MFSD8-213ENST00000641134 1327 ntBASIC1.04□□□□□ -2.24
FOXA3P55318 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
FOXA3P55318 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
FOXA3P55318 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXA3P55318 MIR424-201ENST00000362227 98 ntBASIC1.03□□□□□ -2.24
FOXA3P55318 SNORD114-1-201ENST00000362705 72 ntBASIC1.03□□□□□ -2.24
FOXA3P55318 AL133264.1-201ENST00000407157 562 ntBASIC1.03□□□□□ -2.24
FOXA3P55318 MIR1283-2-201ENST00000408621 87 ntBASIC1.03□□□□□ -2.24
FOXA3P55318 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.03□□□□□ -2.24
FOXA3P55318 UBE2FP1-201ENST00000416536 447 ntBASIC1.03□□□□□ -2.24
FOXA3P55318 AL451054.2-201ENST00000420896 202 ntBASIC1.03□□□□□ -2.24
FOXA3P55318 AC097463.2-201ENST00000421074 142 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms