Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VCPP55072 TXNP7-201ENST00000406296 293 ntBASIC2.73□□□□□ -1.97
VCPP55072 RNU6-920P-201ENST00000410926 92 ntBASIC2.73□□□□□ -1.97
VCPP55072 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.73□□□□□ -1.97
VCPP55072 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.73□□□□□ -1.97
VCPP55072 AL358075.3-201ENST00000426289 226 ntBASIC2.73□□□□□ -1.97
VCPP55072 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.73□□□□□ -1.97
VCPP55072 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.73□□□□□ -1.97
VCPP55072 BMI1P1-201ENST00000445879 941 ntBASIC2.73□□□□□ -1.97
VCPP55072 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.73□□□□□ -1.97
VCPP55072 AC098826.2-201ENST00000452011 651 ntBASIC2.73□□□□□ -1.97
VCPP55072 ZNF114P1-201ENST00000453500 292 ntBASIC2.73□□□□□ -1.97
VCPP55072 RNU7-59P-201ENST00000459101 61 ntBASIC2.73□□□□□ -1.97
VCPP55072 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VCPP55072 AC010486.2-201ENST00000505572 483 ntBASIC2.73□□□□□ -1.97
VCPP55072 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.73□□□□□ -1.97
VCPP55072 RNU6-1003P-201ENST00000517099 105 ntBASIC2.73□□□□□ -1.97
VCPP55072 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.73□□□□□ -1.97
VCPP55072 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.73□□□□□ -1.97
VCPP55072 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.73□□□□□ -1.97
VCPP55072 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VCPP55072 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VCPP55072 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.73□□□□□ -1.97
VCPP55072 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.73□□□□□ -1.97
VCPP55072 MTND3P12-201ENST00000559068 328 ntBASIC2.73□□□□□ -1.97
VCPP55072 RPL23AP84-201ENST00000571193 464 ntBASIC2.73□□□□□ -1.97
VCPP55072 AC009163.5-201ENST00000575421 637 ntBASIC2.73□□□□□ -1.97
VCPP55072 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
VCPP55072 AF038458.1-201ENST00000588406 262 ntBASIC2.73□□□□□ -1.97
VCPP55072 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.73□□□□□ -1.97
VCPP55072 AC025811.1-201ENST00000604312 472 ntBASIC2.73□□□□□ -1.97
VCPP55072 AC016727.1-205ENST00000605437 569 ntBASIC2.73□□□□□ -1.97
VCPP55072 OR10AB1P-201ENST00000609613 938 ntBASIC2.73□□□□□ -1.97
VCPP55072 AL355472.4-201ENST00000610233 626 ntBASIC2.73□□□□□ -1.97
VCPP55072 AC034102.8-201ENST00000615146 484 ntBASIC2.73□□□□□ -1.97
VCPP55072 AL603755.1-201ENST00000619504 163 ntBASIC2.73□□□□□ -1.97
VCPP55072 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VCPP55072 AL445523.1-201ENST00000451184 1362 ntBASIC2.73□□□□□ -1.97
VCPP55072 SNORD62.1-201ENST00000362541 86 ntBASIC2.72□□□□□ -1.97
VCPP55072 Y_RNA.46-201ENST00000362695 102 ntBASIC2.72□□□□□ -1.97
VCPP55072 Y_RNA.169-201ENST00000363745 96 ntBASIC2.72□□□□□ -1.97
VCPP55072 RNU1-100P-201ENST00000365255 165 ntBASIC2.72□□□□□ -1.97
VCPP55072 MIR27B-201ENST00000385129 97 ntBASIC2.72□□□□□ -1.97
VCPP55072 AL031577.2-201ENST00000404133 280 ntBASIC2.72□□□□□ -1.97
VCPP55072 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.72□□□□□ -1.97
VCPP55072 AL135786.1-201ENST00000415892 214 ntBASIC2.72□□□□□ -1.97
VCPP55072 USP9YP26-201ENST00000421008 661 ntBASIC2.72□□□□□ -1.97
VCPP55072 SUMO1P4-201ENST00000429430 302 ntBASIC2.72□□□□□ -1.97
VCPP55072 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.72□□□□□ -1.97
VCPP55072 MTCO3P45-201ENST00000443036 613 ntBASIC2.72□□□□□ -1.97
VCPP55072 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.72□□□□□ -1.97
VCPP55072 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.72□□□□□ -1.97
VCPP55072 RPS20P20-201ENST00000460498 340 ntBASIC2.72□□□□□ -1.97
VCPP55072 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VCPP55072 AP000852.1-201ENST00000472460 573 ntBASIC2.72□□□□□ -1.97
VCPP55072 RPL23AP41-201ENST00000484754 458 ntBASIC2.72□□□□□ -1.97
VCPP55072 LARP1BP2-201ENST00000486594 519 ntBASIC2.72□□□□□ -1.97
VCPP55072 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.72□□□□□ -1.97
VCPP55072 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
VCPP55072 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VCPP55072 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
VCPP55072 AC025881.1-201ENST00000518851 512 ntBASIC2.72□□□□□ -1.97
VCPP55072 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.72□□□□□ -1.97
VCPP55072 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.72□□□□□ -1.97
VCPP55072 AC135628.1-201ENST00000568867 534 ntBASIC2.72□□□□□ -1.97
VCPP55072 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.72□□□□□ -1.97
VCPP55072 AC005498.1-201ENST00000592125 465 ntBASIC2.72□□□□□ -1.97
VCPP55072 WISP1-OT1-201ENST00000602893 642 ntBASIC2.72□□□□□ -1.97
VCPP55072 AL355877.2-201ENST00000603670 358 ntBASIC2.72□□□□□ -1.97
VCPP55072 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.72□□□□□ -1.97
VCPP55072 AC010133.1-201ENST00000615809 842 ntBASIC2.72□□□□□ -1.97
VCPP55072 AF246928.1-201ENST00000623768 87 ntBASIC2.72□□□□□ -1.97
VCPP55072 AC093591.3-201ENST00000634516 308 ntBASIC2.72□□□□□ -1.97
VCPP55072 AP003399.1-201ENST00000637534 361 ntBASIC2.72□□□□□ -1.97
VCPP55072 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
VCPP55072 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.72□□□□□ -1.97
VCPP55072 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VCPP55072 PABPC1P9-201ENST00000426076 1612 ntBASIC2.71□□□□□ -1.97
VCPP55072 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.71□□□□□ -1.97
VCPP55072 RNU6-461P-201ENST00000364195 107 ntBASIC2.71□□□□□ -1.98
VCPP55072 RNU6-809P-201ENST00000384461 107 ntBASIC2.71□□□□□ -1.98
VCPP55072 RPS20P2-201ENST00000402520 389 ntBASIC2.71□□□□□ -1.98
VCPP55072 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.71□□□□□ -1.98
VCPP55072 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.71□□□□□ -1.98
VCPP55072 GTF2IP20-201ENST00000431663 360 ntBASIC2.71□□□□□ -1.98
VCPP55072 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.71□□□□□ -1.98
VCPP55072 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.71□□□□□ -1.98
VCPP55072 AL049734.2-201ENST00000441066 616 ntBASIC2.71□□□□□ -1.98
VCPP55072 AC011816.1-201ENST00000441346 546 ntBASIC2.71□□□□□ -1.98
VCPP55072 ELOCP30-201ENST00000447108 299 ntBASIC2.71□□□□□ -1.98
VCPP55072 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.71□□□□□ -1.98
VCPP55072 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.71□□□□□ -1.98
VCPP55072 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.71□□□□□ -1.98
VCPP55072 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.71□□□□□ -1.98
VCPP55072 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.71□□□□□ -1.98
VCPP55072 RNA5SP471-201ENST00000516971 106 ntBASIC2.71□□□□□ -1.98
VCPP55072 MTND4LP18-201ENST00000526864 291 ntBASIC2.71□□□□□ -1.98
VCPP55072 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.71□□□□□ -1.98
VCPP55072 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.71□□□□□ -1.98
VCPP55072 MIR4446-201ENST00000578505 67 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms