Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MIR490-201ENST00000384865 128 ntBASIC2.79□□□□□ -1.96
VIMP08670 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC009518.2-201ENST00000418056 731 ntBASIC2.79□□□□□ -1.96
VIMP08670 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.79□□□□□ -1.96
VIMP08670 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.79□□□□□ -1.96
VIMP08670 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.79□□□□□ -1.96
VIMP08670 RPS24P1-201ENST00000438550 371 ntBASIC2.79□□□□□ -1.96
VIMP08670 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VIMP08670 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.79□□□□□ -1.96
VIMP08670 MTATP6P7-201ENST00000453315 681 ntBASIC2.79□□□□□ -1.96
VIMP08670 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.79□□□□□ -1.96
VIMP08670 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.79□□□□□ -1.96
VIMP08670 RN7SL807P-201ENST00000470923 297 ntBASIC2.79□□□□□ -1.96
VIMP08670 RPL23AP70-201ENST00000483361 460 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC008716.1-201ENST00000511084 513 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.79□□□□□ -1.96
VIMP08670 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.79□□□□□ -1.96
VIMP08670 Y_RNA.689-201ENST00000516589 107 ntBASIC2.79□□□□□ -1.96
VIMP08670 RNU6-914P-201ENST00000516749 109 ntBASIC2.79□□□□□ -1.96
VIMP08670 AP003122.3-201ENST00000526316 255 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC084851.1-201ENST00000529105 249 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.79□□□□□ -1.96
VIMP08670 MIR3167-201ENST00000579623 85 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.79□□□□□ -1.96
VIMP08670 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.79□□□□□ -1.96
VIMP08670 ZNF861P-201ENST00000588126 639 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC174048.1-201ENST00000603389 144 ntBASIC2.79□□□□□ -1.96
VIMP08670 AL049779.4-201ENST00000604500 156 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC073114.1-201ENST00000612027 490 ntBASIC2.79□□□□□ -1.96
VIMP08670 AC110994.2-201ENST00000635481 492 ntBASIC2.79□□□□□ -1.96
VIMP08670 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VIMP08670 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VIMP08670 OR5J1P-201ENST00000313544 939 ntBASIC2.78□□□□□ -1.96
VIMP08670 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
VIMP08670 RNU4-91P-201ENST00000364778 135 ntBASIC2.78□□□□□ -1.96
VIMP08670 RNU6-750P-201ENST00000390946 107 ntBASIC2.78□□□□□ -1.96
VIMP08670 AC114491.1-201ENST00000416095 246 ntBASIC2.78□□□□□ -1.96
VIMP08670 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.78□□□□□ -1.96
VIMP08670 ISCA1P6-201ENST00000427740 390 ntBASIC2.78□□□□□ -1.96
VIMP08670 SUMO1P4-201ENST00000429430 302 ntBASIC2.78□□□□□ -1.96
VIMP08670 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 RPL23AP30-201ENST00000432419 501 ntBASIC2.78□□□□□ -1.96
VIMP08670 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.78□□□□□ -1.96
VIMP08670 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 GAPDHP17-201ENST00000449858 1001 ntBASIC2.78□□□□□ -1.96
VIMP08670 FABP5P13-201ENST00000452144 328 ntBASIC2.78□□□□□ -1.96
VIMP08670 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.78□□□□□ -1.96
VIMP08670 SNORD42A-201ENST00000459584 64 ntBASIC2.78□□□□□ -1.96
VIMP08670 AC073901.1-201ENST00000462471 408 ntBASIC2.78□□□□□ -1.96
VIMP08670 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.78□□□□□ -1.96
VIMP08670 AC026427.2-201ENST00000506228 536 ntBASIC2.78□□□□□ -1.96
VIMP08670 AC098591.2-201ENST00000510152 315 ntBASIC2.78□□□□□ -1.96
VIMP08670 SAP18P1-201ENST00000512058 390 ntBASIC2.78□□□□□ -1.96
VIMP08670 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.78□□□□□ -1.96
VIMP08670 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.78□□□□□ -1.96
VIMP08670 MIR5680-201ENST00000577577 84 ntBASIC2.78□□□□□ -1.96
VIMP08670 MIR3682-201ENST00000581338 84 ntBASIC2.78□□□□□ -1.96
VIMP08670 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.78□□□□□ -1.96
VIMP08670 AC073544.2-201ENST00000601155 540 ntBASIC2.78□□□□□ -1.96
VIMP08670 AL590229.1-201ENST00000603497 542 ntBASIC2.78□□□□□ -1.96
VIMP08670 AC119501.1-201ENST00000603646 475 ntBASIC2.78□□□□□ -1.96
VIMP08670 OR2AS2P-201ENST00000606902 342 ntBASIC2.78□□□□□ -1.96
VIMP08670 AC011939.3-201ENST00000613686 466 ntBASIC2.78□□□□□ -1.96
VIMP08670 AP001506.1-201ENST00000615444 211 ntBASIC2.78□□□□□ -1.96
VIMP08670 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.78□□□□□ -1.96
VIMP08670 AC022079.1-201ENST00000621546 602 ntBASIC2.78□□□□□ -1.96
VIMP08670 PISRT1-201ENST00000626175 531 ntBASIC2.78□□□□□ -1.96
VIMP08670 MIR3199-2-201ENST00000636243 86 ntBASIC2.78□□□□□ -1.96
VIMP08670 MIR3974-201ENST00000637126 96 ntBASIC2.78□□□□□ -1.96
VIMP08670 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VIMP08670 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VIMP08670 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.78□□□□□ -1.96
VIMP08670 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VIMP08670 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VIMP08670 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VIMP08670 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VIMP08670 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VIMP08670 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.77□□□□□ -1.97
VIMP08670 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VIMP08670 RNY1P12-201ENST00000364251 105 ntBASIC2.77□□□□□ -1.97
VIMP08670 SNORA4.3-201ENST00000365564 137 ntBASIC2.77□□□□□ -1.97
VIMP08670 RNY3P9-201ENST00000384727 106 ntBASIC2.77□□□□□ -1.97
VIMP08670 MIR558-201ENST00000384920 94 ntBASIC2.77□□□□□ -1.97
VIMP08670 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.77□□□□□ -1.97
VIMP08670 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.77□□□□□ -1.97
VIMP08670 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.77□□□□□ -1.97
VIMP08670 AC092427.1-202ENST00000430569 476 ntBASIC2.77□□□□□ -1.97
VIMP08670 AL591704.1-201ENST00000432574 275 ntBASIC2.77□□□□□ -1.97
VIMP08670 AL159987.2-201ENST00000432754 307 ntBASIC2.77□□□□□ -1.97
VIMP08670 AC009961.2-201ENST00000435771 251 ntBASIC2.77□□□□□ -1.97
VIMP08670 AL513043.1-201ENST00000439124 535 ntBASIC2.77□□□□□ -1.97
VIMP08670 Z75741.1-201ENST00000446793 314 ntBASIC2.77□□□□□ -1.97
VIMP08670 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.77□□□□□ -1.97
VIMP08670 AC128713.1-201ENST00000471495 306 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms