Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AL109913.1-201ENST00000421173 514 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 MTCO1P53-201ENST00000441633 699 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AL591719.1-201ENST00000444669 744 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 DYNLL1P5-201ENST00000467158 270 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 TRBV1-201ENST00000476502 284 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AC079395.1-201ENST00000510981 262 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AC008837.2-201ENST00000513076 418 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 OR11H5P-201ENST00000554039 926 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AL589743.7-201ENST00000612637 233 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AL161423.1-201ENST00000613700 262 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AC109809.1-201ENST00000619665 545 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 AC231657.1-201ENST00000624313 397 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 MIR3199-2-201ENST00000636243 86 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CTNNA3Q9UI47 RNU6-343P-201ENST00000364709 104 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 RNU6-413P-201ENST00000384115 107 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AL355497.1-201ENST00000406262 551 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 HMGN2P23-201ENST00000456759 269 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 KLF3P2-201ENST00000465138 268 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AC104563.1-201ENST00000476147 376 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 RPS27AP10-201ENST00000496103 208 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 SNORA31.6-201ENST00000516241 130 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 NACAP3-201ENST00000552100 481 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AC025811.1-201ENST00000604312 472 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AC007349.4-201ENST00000608114 532 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AC010678.1-201ENST00000614118 713 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 AC025048.6-202ENST00000627667 438 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 HSPA8P4-201ENST00000511877 1920 ntBASIC2.5□□□□□ -2.01
CTNNA3Q9UI47 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 RNA5SP125-201ENST00000364843 120 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 RNU4-52P-201ENST00000384209 138 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 RNU6-114P-201ENST00000384704 105 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 RNU6-754P-201ENST00000391166 107 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 CCNG1P1-201ENST00000406783 885 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AL953862.1-201ENST00000423016 168 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 MICF-203ENST00000432679 129 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 NANOGP2-201ENST00000435391 727 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 SNRPEP9-201ENST00000436794 238 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AC098831.1-201ENST00000440661 216 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 RNU6-717P-201ENST00000459076 104 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 CYCSP2-201ENST00000558168 301 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AF038458.1-201ENST00000588406 262 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AC010378.1-201ENST00000619270 362 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AL138960.2-201ENST00000625145 535 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 AC092447.10-201ENST00000620607 1652 ntBASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.49□□□□□ -2.01
CTNNA3Q9UI47 MTND5P30-201ENST00000452896 1731 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 Y_RNA.311-201ENST00000365068 96 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 RNA5SP138-201ENST00000365098 114 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 RNU6-432P-201ENST00000384196 109 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 Y_RNA.472-201ENST00000384322 102 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 SNORA64-201ENST00000384674 134 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 AL356421.1-201ENST00000403255 413 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 RN7SKP32-201ENST00000410167 303 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 MTND5P14-201ENST00000441481 1267 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 RPL23AP76-201ENST00000441860 458 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 ZNF886P-201ENST00000450781 723 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 AC117522.2-201ENST00000510049 657 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 SNORA19.3-201ENST00000516165 130 ntBASIC2.48□□□□□ -2.01
CTNNA3Q9UI47 MIR892C-201ENST00000516410 77 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms