Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC099654.13-201ENST00000639774 207 ntBASIC2.7□□□□□ -1.98
RNF41Q9H4P4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 RNU5A-8P-201ENST00000364102 114 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 RNU1-73P-201ENST00000383971 164 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AL591416.1-201ENST00000404015 867 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 TXNP7-201ENST00000406296 293 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 MIR1290-201ENST00000408735 78 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 Z85995.1-201ENST00000415547 335 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AL135786.1-201ENST00000415892 214 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AL356583.2-201ENST00000426536 280 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 ELOCP30-201ENST00000447108 299 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 RPS20P20-201ENST00000460498 340 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 RPL23AP49-201ENST00000492925 468 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC112204.1-201ENST00000502591 103 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC010486.3-201ENST00000511602 785 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC008413.1-201ENST00000511864 177 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 FABP5P5-201ENST00000515537 406 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC022616.6-201ENST00000520479 119 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 DEFB108A-201ENST00000530110 222 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 MIR548AB-201ENST00000584917 84 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 AC009878.1-201ENST00000621819 340 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 MIR3974-201ENST00000637126 96 ntBASIC2.69□□□□□ -1.98
RNF41Q9H4P4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF41Q9H4P4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 RNU4-1-201ENST00000363925 141 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 RNY3P9-201ENST00000384727 106 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AL139397.2-201ENST00000404529 772 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 BTF3P7-201ENST00000407097 488 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AL451054.2-201ENST00000420896 202 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AL356320.1-201ENST00000429616 163 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 MED14P1-201ENST00000430517 648 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC092573.2-201ENST00000434546 243 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 PGBD4P3-201ENST00000440731 581 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 TAF9P1-201ENST00000445421 515 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC009237.8-201ENST00000445492 379 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 TAF9P2-201ENST00000454958 515 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC027673.1-201ENST00000456245 405 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AL031183.1-201ENST00000457667 207 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC008481.1-201ENST00000463278 396 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 LARP1BP2-201ENST00000486594 519 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 RPL30P5-201ENST00000494923 336 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 RNU6-1256P-201ENST00000516539 103 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 Y_RNA.688-201ENST00000516565 95 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AP003181.2-201ENST00000528941 181 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC022878.1-201ENST00000530684 149 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AF038458.1-201ENST00000588406 262 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 KC877982.1-201ENST00000602313 470 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC012360.2-201ENST00000609349 391 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC091953.2-201ENST00000623979 160 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AC068057.2-201ENST00000624047 895 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 AL603839.4-201ENST00000624658 1005 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
RNF41Q9H4P4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF41Q9H4P4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 RNU6-270P-201ENST00000364131 105 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 SNORA1.3-201ENST00000384676 136 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 RNA5SP252-201ENST00000391131 119 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 RPS4XP3-201ENST00000398541 413 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AL359634.1-202ENST00000404721 284 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC007064.1-201ENST00000412238 351 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 RPL17P12-201ENST00000413391 526 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 RPL21P24-201ENST00000413752 448 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC090960.1-201ENST00000421072 306 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AL356867.1-201ENST00000429623 299 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 MTND1P28-201ENST00000435623 950 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AL590664.1-201ENST00000448065 339 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF41Q9H4P4 AC116337.2-201ENST00000477662 156 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 RPL30P14-201ENST00000482744 348 ntBASIC2.67□□□□□ -1.98
RNF41Q9H4P4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms