Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.33□□□□□ -1.88
NPAS1Q99742 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NPAS1Q99742 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS1Q99742 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS1Q99742 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS1Q99742 Y_RNA.390-201ENST00000383932 102 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 SNORA32.2-201ENST00000384049 122 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 RNU6-38P-201ENST00000384085 107 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 Y_RNA.534-201ENST00000384599 112 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 SNORA1.3-201ENST00000384676 136 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 MT-TL1-201ENST00000386347 75 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AL356776.1-201ENST00000406574 447 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 SYF2P2-201ENST00000417620 583 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS1Q99742 ARL5AP1-201ENST00000418991 388 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 DBIP2-201ENST00000419076 262 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 RPL30P16-201ENST00000419341 429 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AL035423.1-201ENST00000420331 213 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AL158156.1-201ENST00000422509 473 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS1Q99742 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.33□□□□□ -1.88
NPAS1Q99742 MTATP6P23-201ENST00000440153 476 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 MTCO3P18-201ENST00000440206 761 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 RPS29P31-201ENST00000446147 164 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 RPL12P25-201ENST00000455592 494 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS1Q99742 RNU6-333P-201ENST00000459117 107 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 RPL21P41-201ENST00000459863 264 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 RPL23AP11-201ENST00000475260 469 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS1Q99742 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS1Q99742 MTCYBP18-201ENST00000501056 747 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 RNA5SP164-201ENST00000516533 110 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS1Q99742 PSMA2P1-201ENST00000526365 646 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.33□□□□□ -1.88
NPAS1Q99742 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.33□□□□□ -1.88
NPAS1Q99742 AL138976.2-201ENST00000563989 694 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS1Q99742 MIR1273C-201ENST00000578669 77 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 U2.17-201ENST00000611454 95 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AC068831.7-201ENST00000616954 363 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AC099506.2-201ENST00000623074 221 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 CR392039.5-201ENST00000623201 510 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NPAS1Q99742 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
NPAS1Q99742 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS1Q99742 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS1Q99742 MTND4P35-201ENST00000604257 1375 ntBASIC3.33□□□□□ -1.88
NPAS1Q99742 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS1Q99742 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS1Q99742 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.33□□□□□ -1.88
NPAS1Q99742 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS1Q99742 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
NPAS1Q99742 Y_RNA.33-201ENST00000362591 102 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 Y_RNA.157-201ENST00000363638 102 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 RNU4-20P-201ENST00000365601 151 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 RNU6-434P-201ENST00000384376 107 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 RNU6-1179P-201ENST00000384667 107 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 MIR554-201ENST00000384874 96 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NPAS1Q99742 RPL21P17-201ENST00000397467 475 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AL592114.1-201ENST00000403842 483 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 RNU6-1025P-201ENST00000410629 104 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS1Q99742 AL513185.2-201ENST00000425543 193 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS1Q99742 RPL23AP69-201ENST00000431134 458 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 SNRPEP9-201ENST00000436794 238 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS1Q99742 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.32□□□□□ -1.88
NPAS1Q99742 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS1Q99742 SNORA84-201ENST00000459229 133 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 SUMO2P6-201ENST00000505273 288 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS1Q99742 AC104136.1-201ENST00000512969 394 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 RNU1-95P-201ENST00000516357 160 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 RNU1-128P-201ENST00000516704 160 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 RNU6-928P-201ENST00000516876 104 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 CENPUP1-201ENST00000526649 1202 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AL121579.1-201ENST00000555129 305 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS1Q99742 AL157871.3-201ENST00000557231 293 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS1Q99742 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS1Q99742 AC005730.3-201ENST00000583067 366 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AC011712.1-201ENST00000588959 234 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS1Q99742 AC136601.2-201ENST00000604356 474 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 RNU6-89P-201ENST00000606519 100 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS1Q99742 AC073308.1-201ENST00000623696 305 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS1Q99742 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS1Q99742 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
NPAS1Q99742 HSPA8P4-201ENST00000511877 1920 ntBASIC3.32□□□□□ -1.88
NPAS1Q99742 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS1Q99742 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms