Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 BX248409.1-201ENST00000455497 255 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU6-420P-201ENST00000458780 107 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RPL7P18-201ENST00000478965 734 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNA5SP285-201ENST00000516619 119 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 ANP32BP3-201ENST00000559213 706 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC095057.3-201ENST00000567102 1157 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MIR1273G-201ENST00000577677 100 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC002545.1-201ENST00000592511 181 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC092954.1-201ENST00000609121 445 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 Y_RNA.324-201ENST00000365165 102 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 Y_RNA.390-201ENST00000383932 102 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RPS29P23-201ENST00000458635 123 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL049714.1-201ENST00000466686 347 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC096571.1-202ENST00000506634 735 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC019176.1-201ENST00000518519 225 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC087481.2-201ENST00000565492 330 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC105245.1-201ENST00000581934 244 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC008739.2-201ENST00000597006 317 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MIR934-201ENST00000401241 83 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL356379.1-201ENST00000414105 126 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC079203.1-201ENST00000487972 404 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MIR3609-201ENST00000582661 80 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC010738.1-201ENST00000604970 987 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC083806.3-201ENST00000614016 455 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU1-133P-201ENST00000364867 167 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU6-441P-201ENST00000384545 106 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL357078.2-201ENST00000416486 427 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 EBAG9P1-201ENST00000418955 543 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL365496.1-201ENST00000426885 215 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL645568.3-201ENST00000433683 316 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC009474.2-201ENST00000451383 136 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MTND2P24-201ENST00000453434 806 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RPS29P1-201ENST00000465274 159 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 SETP11-201ENST00000473027 690 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 FO393415.2-201ENST00000480085 343 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC009901.1-201ENST00000506703 541 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL078605.1-201ENST00000603529 500 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 UBE2V1P13-201ENST00000436983 439 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MTND1P18-201ENST00000448191 573 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU6-1132P-201ENST00000459214 107 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC090453.1-201ENST00000495560 436 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU6-928P-201ENST00000516876 104 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU6-1223P-201ENST00000517124 104 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 DUXAP5-201ENST00000529668 529 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 HSPE1P3-201ENST00000559254 309 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 BX322635.1-201ENST00000605804 496 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL020996.3-201ENST00000606617 222 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC097504.2-201ENST00000608088 454 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC005332.10-201ENST00000612725 619 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC025594.3-201ENST00000613068 790 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC010678.1-201ENST00000614118 713 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC116618.1-201ENST00000634617 774 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC007785.2-201ENST00000598627 1916 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 SNORD51.1-201ENST00000365405 77 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RNU6-1197P-201ENST00000391183 107 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL512604.1-201ENST00000404812 257 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 SNORD23.1-201ENST00000408212 104 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL445183.3-201ENST00000414168 502 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 SNORD121B-201ENST00000458838 81 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 RPL21P47-201ENST00000483696 477 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL592148.2-201ENST00000612210 372 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL356585.4-201ENST00000623078 1229 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 AL590396.2-201ENST00000636511 1041 ntBASIC0.42□□□□□ -2.34
SYNE1Q8NF91 MIR1290-201ENST00000408735 78 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 RPP40P1-201ENST00000426762 456 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 ZNF965P-201ENST00000432501 817 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 SNRPGP13-201ENST00000442212 177 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC004223.1-201ENST00000479840 271 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC027575.1-201ENST00000481064 460 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC090096.1-201ENST00000489168 390 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AL160314.1-201ENST00000490836 438 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 AC110760.3-202ENST00000515177 371 ntBASIC0.41□□□□□ -2.34
SYNE1Q8NF91 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
SYNE1Q8NF91 EEF1B2P4-201ENST00000551398 348 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms