Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL355297.2-201ENST00000604792 129 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.55□□□□□ -2.32
PRKDCP78527 AL606495.1-201ENST00000422100 813 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.55□□□□□ -2.32
PRKDCP78527 HMGB1P9-201ENST00000429856 646 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 HMGB1P38-201ENST00000490557 577 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
PRKDCP78527 MIR4658-201ENST00000584344 65 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.55□□□□□ -2.32
PRKDCP78527 AC079395.3-201ENST00000615161 484 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 FAM157B-203ENST00000639350 358 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 LINC02211-204ENST00000642024 1070 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 ELOCP11-201ENST00000436690 332 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 ELOCP16-201ENST00000444494 332 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC117503.1-201ENST00000472241 394 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC112198.4-201ENST00000515450 351 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.54□□□□□ -2.32
PRKDCP78527 AC243960.4-201ENST00000600532 288 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC073111.2-201ENST00000605657 1075 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC012213.4-201ENST00000606457 354 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AL050343.2-201ENST00000607338 280 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AL773524.1-201ENST00000614065 229 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC004852.3-201ENST00000614131 326 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC009090.3-201ENST00000616553 565 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 FRG1HP-204ENST00000617940 757 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC018755.4-201ENST00000619715 454 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
PRKDCP78527 RNU7-23P-201ENST00000459465 62 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.54□□□□□ -2.32
PRKDCP78527 AC055731.1-201ENST00000474387 401 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 HMGB3P3-201ENST00000510526 400 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.54□□□□□ -2.32
PRKDCP78527 AC010186.2-204ENST00000537668 439 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PRKDCP78527 MTCYBP23-201ENST00000558717 1102 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.54□□□□□ -2.32
PRKDCP78527 MIR4802-201ENST00000581881 80 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AP000654.2-201ENST00000605633 586 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.54□□□□□ -2.32
PRKDCP78527 AC007792.1-201ENST00000623023 402 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC079597.1-201ENST00000624306 508 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
PRKDCP78527 AC068050.1-201ENST00000394891 380 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC244453.4-201ENST00000419150 388 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC246680.2-201ENST00000422106 389 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.54□□□□□ -2.32
PRKDCP78527 EIF4EP4-201ENST00000424916 578 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 SDAD1P3-201ENST00000427380 333 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.54□□□□□ -2.32
PRKDCP78527 RPS27P21-201ENST00000486977 252 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AC026801.1-201ENST00000497178 464 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 MTCYBP16-201ENST00000509187 1129 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 RN7SKP179-201ENST00000516126 217 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AL138976.2-201ENST00000563989 694 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 HMGN1P30-201ENST00000589286 268 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 AL118508.4-201ENST00000624142 1176 ntBASIC0.54□□□□□ -2.32
PRKDCP78527 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PRKDCP78527 CBX3P1-201ENST00000325243 554 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 RNA5SP240-201ENST00000365355 128 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 SEPT2P1-201ENST00000419651 180 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 MTCYBP29-201ENST00000436327 1006 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
PRKDCP78527 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.53□□□□□ -2.32
PRKDCP78527 RNU6-1155P-201ENST00000363554 107 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 ZNF90P2-204ENST00000419323 1075 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.53□□□□□ -2.32
PRKDCP78527 NDUFB4P2-201ENST00000509515 391 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.53□□□□□ -2.32
PRKDCP78527 RNU6-970P-201ENST00000516312 107 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC104997.1-201ENST00000519761 717 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC107954.1-201ENST00000565906 727 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC079148.1-201ENST00000565944 819 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 MIR4514-201ENST00000581410 57 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.53□□□□□ -2.32
PRKDCP78527 AC009902.3-201ENST00000606235 2172 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC008163.1-202ENST00000636004 2889 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 MTND5P11-201ENST00000511037 1812 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 ZNF519P1-201ENST00000449011 1626 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AL356421.1-201ENST00000403255 413 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 SNORA81-201ENST00000408493 178 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.53□□□□□ -2.32
PRKDCP78527 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.53□□□□□ -2.32
PRKDCP78527 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.53□□□□□ -2.32
PRKDCP78527 AL353689.1-201ENST00000438895 199 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.53□□□□□ -2.32
PRKDCP78527 SUB1P1-201ENST00000524415 382 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC090616.3-201ENST00000582184 217 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC078899.2-201ENST00000595282 212 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC010620.1-201ENST00000601088 1102 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 HSPE1P7-201ENST00000604681 321 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC004908.2-201ENST00000609090 574 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC002550.2-201ENST00000621246 394 ntBASIC0.53□□□□□ -2.32
PRKDCP78527 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
PRKDCP78527 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.53□□□□□ -2.32
PRKDCP78527 RNU6-1164P-201ENST00000364428 107 ntBASIC0.53□□□□□ -2.33
PRKDCP78527 MIR493-201ENST00000385254 89 ntBASIC0.53□□□□□ -2.33
PRKDCP78527 MIR1265-201ENST00000408444 86 ntBASIC0.53□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms