Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 NDUFB4P2-201ENST00000509515 391 ntBASIC2.6□□□□□ -1.99
RFC4P35249 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.6□□□□□ -1.99
RFC4P35249 AP003497.1-201ENST00000528472 562 ntBASIC2.6□□□□□ -1.99
RFC4P35249 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.6□□□□□ -1.99
RFC4P35249 AC110588.1-201ENST00000559699 137 ntBASIC2.6□□□□□ -1.99
RFC4P35249 AC087465.1-201ENST00000560574 245 ntBASIC2.6□□□□□ -1.99
RFC4P35249 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.6□□□□□ -1.99
RFC4P35249 MIR4658-201ENST00000584344 65 ntBASIC2.6□□□□□ -1.99
RFC4P35249 AL353997.4-201ENST00000586196 166 ntBASIC2.6□□□□□ -1.99
RFC4P35249 AL450336.1-201ENST00000605180 586 ntBASIC2.6□□□□□ -1.99
RFC4P35249 AC144521.1-201ENST00000607148 956 ntBASIC2.6□□□□□ -1.99
RFC4P35249 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.6□□□□□ -1.99
RFC4P35249 AC097478.2-201ENST00000610572 514 ntBASIC2.6□□□□□ -1.99
RFC4P35249 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RFC4P35249 MIR6130-201ENST00000619419 109 ntBASIC2.6□□□□□ -1.99
RFC4P35249 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RFC4P35249 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RFC4P35249 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.59□□□□□ -1.99
RFC4P35249 RNU5E-8P-201ENST00000363502 116 ntBASIC2.59□□□□□ -1.99
RFC4P35249 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
RFC4P35249 RNU6-114P-201ENST00000384704 105 ntBASIC2.59□□□□□ -1.99
RFC4P35249 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
RFC4P35249 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RFC4P35249 AL139156.1-201ENST00000412785 841 ntBASIC2.59□□□□□ -1.99
RFC4P35249 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC4P35249 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC4P35249 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC4P35249 SEPT2P1-201ENST00000419651 180 ntBASIC2.59□□□□□ -1.99
RFC4P35249 PPP1R11P2-201ENST00000423543 382 ntBASIC2.59□□□□□ -1.99
RFC4P35249 AC084290.1-201ENST00000434995 374 ntBASIC2.59□□□□□ -1.99
RFC4P35249 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.59□□□□□ -1.99
RFC4P35249 UBE2V1P13-201ENST00000436983 439 ntBASIC2.59□□□□□ -1.99
RFC4P35249 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.59□□□□□ -1.99
RFC4P35249 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC4P35249 SUMO2P6-201ENST00000505273 288 ntBASIC2.59□□□□□ -1.99
RFC4P35249 AC114786.4-201ENST00000508771 728 ntBASIC2.59□□□□□ -1.99
RFC4P35249 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.59□□□□□ -1.99
RFC4P35249 MTCYBP43-201ENST00000513621 740 ntBASIC2.59□□□□□ -1.99
RFC4P35249 AC114797.1-201ENST00000514003 728 ntBASIC2.59□□□□□ -1.99
RFC4P35249 BTF3P12-201ENST00000519620 469 ntBASIC2.59□□□□□ -1.99
RFC4P35249 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.59□□□□□ -1.99
RFC4P35249 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC4P35249 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.59□□□□□ -1.99
RFC4P35249 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC4P35249 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC4P35249 BNIP3P40-201ENST00000596017 556 ntBASIC2.59□□□□□ -1.99
RFC4P35249 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC4P35249 OR10AB1P-201ENST00000609613 938 ntBASIC2.59□□□□□ -1.99
RFC4P35249 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.59□□□□□ -1.99
RFC4P35249 AC011477.1-204ENST00000623416 1325 ntBASIC2.59□□□□□ -2
RFC4P35249 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
RFC4P35249 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
RFC4P35249 RNU6-1078P-201ENST00000364522 103 ntBASIC2.58□□□□□ -2
RFC4P35249 RNU6-741P-201ENST00000383889 107 ntBASIC2.58□□□□□ -2
RFC4P35249 RNU6-83P-201ENST00000384568 112 ntBASIC2.58□□□□□ -2
RFC4P35249 ANAPC10P1-201ENST00000395991 556 ntBASIC2.58□□□□□ -2
RFC4P35249 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
RFC4P35249 MTCO3P30-201ENST00000426425 670 ntBASIC2.58□□□□□ -2
RFC4P35249 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.58□□□□□ -2
RFC4P35249 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.58□□□□□ -2
RFC4P35249 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.58□□□□□ -2
RFC4P35249 AC021382.1-201ENST00000483523 359 ntBASIC2.58□□□□□ -2
RFC4P35249 AC024589.1-201ENST00000512207 263 ntBASIC2.58□□□□□ -2
RFC4P35249 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.58□□□□□ -2
RFC4P35249 AC022634.1-201ENST00000520765 532 ntBASIC2.58□□□□□ -2
RFC4P35249 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.58□□□□□ -2
RFC4P35249 AP000889.2-201ENST00000532684 490 ntBASIC2.58□□□□□ -2
RFC4P35249 GNAI2P1-201ENST00000541815 315 ntBASIC2.58□□□□□ -2
RFC4P35249 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.58□□□□□ -2
RFC4P35249 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
RFC4P35249 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.58□□□□□ -2
RFC4P35249 AC090186.1-201ENST00000605991 572 ntBASIC2.58□□□□□ -2
RFC4P35249 AC007349.4-201ENST00000608114 532 ntBASIC2.58□□□□□ -2
RFC4P35249 AC092106.3-201ENST00000611308 722 ntBASIC2.58□□□□□ -2
RFC4P35249 AL603758.1-201ENST00000618654 241 ntBASIC2.58□□□□□ -2
RFC4P35249 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.58□□□□□ -2
RFC4P35249 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
RFC4P35249 PABPC1P9-201ENST00000426076 1612 ntBASIC2.57□□□□□ -2
RFC4P35249 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
RFC4P35249 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
RFC4P35249 SNORA4.1-201ENST00000364263 144 ntBASIC2.57□□□□□ -2
RFC4P35249 RNU6-359P-201ENST00000365466 108 ntBASIC2.57□□□□□ -2
RFC4P35249 MIR513B-201ENST00000385136 84 ntBASIC2.57□□□□□ -2
RFC4P35249 MIR320C1-201ENST00000408566 88 ntBASIC2.57□□□□□ -2
RFC4P35249 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.57□□□□□ -2
RFC4P35249 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.57□□□□□ -2
RFC4P35249 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.57□□□□□ -2
RFC4P35249 AL445685.2-201ENST00000422551 342 ntBASIC2.57□□□□□ -2
RFC4P35249 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.57□□□□□ -2
RFC4P35249 SNRPEP7-201ENST00000438350 220 ntBASIC2.57□□□□□ -2
RFC4P35249 Z82210.1-201ENST00000440037 231 ntBASIC2.57□□□□□ -2
RFC4P35249 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.57□□□□□ -2
RFC4P35249 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.57□□□□□ -2
RFC4P35249 AL139109.1-201ENST00000455491 297 ntBASIC2.57□□□□□ -2
RFC4P35249 AP1S2P1-201ENST00000457344 379 ntBASIC2.57□□□□□ -2
RFC4P35249 AC104563.1-201ENST00000476147 376 ntBASIC2.57□□□□□ -2
RFC4P35249 RPL23AP63-201ENST00000498752 471 ntBASIC2.57□□□□□ -2
RFC4P35249 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.57□□□□□ -2
RFC4P35249 OR4R1P-201ENST00000529879 463 ntBASIC2.57□□□□□ -2
RFC4P35249 AC078814.3-201ENST00000553036 491 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms