Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PTMAP5-201ENST00000393073 333 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 CISD1P1-201ENST00000393907 327 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AL606923.1-201ENST00000406616 190 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 RNU6-373P-201ENST00000411247 98 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 BX323014.1-201ENST00000412876 237 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.1□□□□□ -1.91
ZIC3O60481 AC080125.1-201ENST00000414888 684 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 BTF3L4P3-201ENST00000418879 476 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.1□□□□□ -1.91
ZIC3O60481 AL590383.1-201ENST00000428602 75 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.1□□□□□ -1.91
ZIC3O60481 AC104058.1-201ENST00000448028 297 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AC093663.1-201ENST00000497190 394 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AC018710.1-201ENST00000506509 158 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 HMGB3P15-201ENST00000507326 574 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZIC3O60481 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.1□□□□□ -1.91
ZIC3O60481 ATP5F1P5-201ENST00000526403 760 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AL137161.1-201ENST00000532231 390 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
ZIC3O60481 AL121579.1-201ENST00000555129 305 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.1□□□□□ -1.91
ZIC3O60481 MIR5583-1-201ENST00000580941 59 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 AL670379.4-201ENST00000605279 254 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 MIR15A-201ENST00000607334 83 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZIC3O60481 AP001148.1-201ENST00000624124 2359 ntBASIC3.1□□□□□ -1.91
ZIC3O60481 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
ZIC3O60481 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZIC3O60481 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZIC3O60481 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.09□□□□□ -1.91
ZIC3O60481 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZIC3O60481 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZIC3O60481 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZIC3O60481 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZIC3O60481 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.09□□□□□ -1.91
ZIC3O60481 Y_RNA.231-201ENST00000364358 102 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 RNU6-741P-201ENST00000383889 107 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 RNU6-116P-201ENST00000384042 109 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 RNU6-1197P-201ENST00000391183 107 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AL356776.1-201ENST00000406574 447 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 RNA5SP44-201ENST00000410446 133 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.09□□□□□ -1.91
ZIC3O60481 AL160275.3-201ENST00000423876 471 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.09□□□□□ -1.91
ZIC3O60481 RPS29P31-201ENST00000446147 164 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 PRSS3P4-201ENST00000453323 162 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 AL160314.1-201ENST00000490836 438 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC091885.1-201ENST00000506658 268 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 FCF1P8-201ENST00000510322 597 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 SNORA70.19-201ENST00000516717 90 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 PSMA2P1-201ENST00000526365 646 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC3O60481 AC006557.5-201ENST00000603126 811 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AL138889.2-201ENST00000603883 242 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 RNU6-89P-201ENST00000606519 100 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC107294.1-201ENST00000609524 467 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AL390240.1-201ENST00000612950 384 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 AC084757.4-201ENST00000616350 526 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 uc_338.34-201ENST00000617467 174 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 U6.42-201ENST00000618440 107 ntBASIC3.09□□□□□ -1.91
ZIC3O60481 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZIC3O60481 MTND4P14-201ENST00000435799 1354 ntBASIC3.09□□□□□ -1.92
ZIC3O60481 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
ZIC3O60481 HSPA8P4-201ENST00000511877 1920 ntBASIC3.09□□□□□ -1.92
ZIC3O60481 AC007785.2-201ENST00000598627 1916 ntBASIC3.09□□□□□ -1.92
ZIC3O60481 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
ZIC3O60481 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC3O60481 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC3O60481 AC090740.1-201ENST00000623193 2262 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.08□□□□□ -1.92
ZIC3O60481 Y_RNA.86-201ENST00000363020 111 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 SNORA72.1-201ENST00000363485 129 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 Y_RNA.157-201ENST00000363638 102 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC3O60481 RNU6-1127P-201ENST00000384580 107 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 MIR34B-201ENST00000385076 84 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 RNU6-332P-201ENST00000391193 108 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC3O60481 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC3O60481 Z98941.1-201ENST00000407764 100 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC3O60481 AC022028.1-201ENST00000412054 408 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.08□□□□□ -1.92
ZIC3O60481 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC3O60481 AC002075.2-201ENST00000425207 252 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AL592045.1-201ENST00000429867 352 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 AL591704.1-201ENST00000432574 275 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
ZIC3O60481 PIGFP3-201ENST00000441918 722 ntBASIC3.08□□□□□ -1.92
ZIC3O60481 RNU7-170P-201ENST00000459303 61 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms