Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SNORA31.18-201ENST00000517043 134 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 RN7SKP258-201ENST00000517151 304 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AC109479.2-201ENST00000517842 174 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 MIR548AC-201ENST00000585049 88 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 AL121932.1-201ENST00000605542 214 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 BX322639.1-202ENST00000423987 2213 ntBASIC5.23□□□□□ -1.57
NUCKS1Q9H1E3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 Y_RNA.292-201ENST00000364904 97 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 RNA5SP428-201ENST00000365129 132 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 ENSAP1-201ENST00000392855 326 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 U3.39-201ENST00000408569 239 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 AC092447.6-201ENST00000414578 210 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 AF186996.5-201ENST00000418098 904 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 AL591043.1-201ENST00000432461 424 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 RPS11P1-201ENST00000451072 473 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 AC087477.1-201ENST00000465747 340 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 RPL23AP2-201ENST00000471227 466 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 RN7SL319P-201ENST00000480656 221 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 VWA8P1-201ENST00000510889 176 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 RNA5SP497-201ENST00000516081 97 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 IGKV2D-36-201ENST00000518643 226 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 MRPS18CP4-201ENST00000535821 231 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 MIR4436B2-201ENST00000581415 91 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 MIR4436B1-201ENST00000583272 91 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 AC024940.4-201ENST00000605507 246 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 AC007390.2-201ENST00000606229 3803 ntBASIC5.22□□□□□ -1.57
NUCKS1Q9H1E3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NUCKS1Q9H1E3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
NUCKS1Q9H1E3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
NUCKS1Q9H1E3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 Y_RNA.233-201ENST00000364407 101 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-937P-201ENST00000384325 106 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-1154P-201ENST00000391001 104 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 MTCYBP2-201ENST00000407745 171 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AC016769.2-201ENST00000414815 475 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 RPS15AP40-201ENST00000419621 391 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AC093414.1-201ENST00000434712 514 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 NUTF2P3-201ENST00000448540 384 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 RPL23AP81-201ENST00000455252 467 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 HSPE1P25-201ENST00000455484 251 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 snoU109.6-201ENST00000516831 118 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AC091905.4-201ENST00000623432 202 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 AC097372.5-201ENST00000623665 376 ntBASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NUCKS1Q9H1E3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 ZFRP1-201ENST00000457579 2970 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 MAPK10-303ENST00000641324 3959 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 INTS6P1-201ENST00000504674 2530 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 SNORA51.8-201ENST00000384234 132 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-959P-201ENST00000384671 107 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 MIR190B-201ENST00000401119 79 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 MIR921-201ENST00000401133 56 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AL033519.2-201ENST00000403958 392 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AC063979.1-201ENST00000415539 377 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms