Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1□□□□□ -2.25
LIMD2Q9BT23 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1□□□□□ -2.25
LIMD2Q9BT23 AC009238.1-201ENST00000442165 424 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 AC009237.6-201ENST00000446969 424 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 VN1R10P-201ENST00000447106 875 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1□□□□□ -2.25
LIMD2Q9BT23 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1□□□□□ -2.25
LIMD2Q9BT23 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1□□□□□ -2.25
LIMD2Q9BT23 RPL21P47-201ENST00000483696 477 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 RPS29P21-201ENST00000496272 170 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1□□□□□ -2.25
LIMD2Q9BT23 AP005597.4-201ENST00000526762 229 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1□□□□□ -2.25
LIMD2Q9BT23 AC110588.1-201ENST00000559699 137 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 AC008269.2-201ENST00000561915 1105 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1□□□□□ -2.25
LIMD2Q9BT23 AC103810.8-201ENST00000607347 118 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1□□□□□ -2.25
LIMD2Q9BT23 AL603758.1-201ENST00000618654 241 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 MIR5739-201ENST00000619803 80 ntBASIC1□□□□□ -2.25
LIMD2Q9BT23 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1□□□□□ -2.25
LIMD2Q9BT23 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1□□□□□ -2.25
LIMD2Q9BT23 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 RNA5SP240-201ENST00000365355 128 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 SUGT1P1-201ENST00000379514 476 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 RNU6-657P-201ENST00000383904 107 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 MIR518A2-201ENST00000384966 87 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 MCTS2P-201ENST00000394552 546 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AL133264.1-201ENST00000407157 562 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 RNU4-26P-201ENST00000410270 107 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 RNU2-2P-201ENST00000410396 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 RNU6-516P-201ENST00000411381 104 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 EIF4EP2-201ENST00000422816 654 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 VN1R42P-201ENST00000424651 344 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 MTND6P13-201ENST00000443510 523 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 HMGN2P10-201ENST00000448085 265 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AL096803.2-201ENST00000450032 677 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 SNORA59A-201ENST00000459326 152 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC018437.1-201ENST00000492214 406 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 TPT1P8-201ENST00000510120 555 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC008837.1-201ENST00000511513 412 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 GNAI2P1-201ENST00000541815 315 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC021739.1-201ENST00000559631 174 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC024619.4-201ENST00000580924 316 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 MIR4713-201ENST00000582691 75 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC005261.5-201ENST00000596280 355 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.15-201ENST00000611544 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.16-201ENST00000613119 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.12-201ENST00000613778 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.20-201ENST00000613956 192 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AL118556.2-201ENST00000614375 824 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.9-201ENST00000615427 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.11-201ENST00000616345 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.2-201ENST00000616535 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.3-201ENST00000617785 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.19-201ENST00000618602 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 RNU2-1-201ENST00000618664 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.6-201ENST00000619225 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.5-201ENST00000619465 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 U2.10-201ENST00000620268 191 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC002550.2-201ENST00000621246 394 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 YWHAEP7-203ENST00000622054 312 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 AC008443.7-201ENST00000622195 246 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LIMD2Q9BT23 ZNF876P-202ENST00000398732 1485 ntBASIC0.99□□□□□ -2.25
LIMD2Q9BT23 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 RNU6-549P-201ENST00000384433 107 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 MIR1294-201ENST00000408503 142 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 RNU6-575P-201ENST00000411326 105 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC007919.1-201ENST00000429380 217 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AL645568.3-201ENST00000433683 316 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 SNRPEP9-201ENST00000436794 238 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 RPL7P54-201ENST00000438336 674 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AC092393.1-201ENST00000439625 742 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AL691517.1-201ENST00000440833 1235 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AL513124.1-201ENST00000450410 614 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 MTND3P4-201ENST00000453537 303 ntBASIC0.98□□□□□ -2.25
LIMD2Q9BT23 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.98□□□□□ -2.25
LIMD2Q9BT23 CYP2C59P-201ENST00000457790 269 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms