Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL451007.1-201ENST00000595491 289 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL391813.1-201ENST00000603098 260 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL109618.2-201ENST00000605527 211 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL589743.7-201ENST00000612637 233 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC107871.2-201ENST00000612894 502 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL359547.2-201ENST00000615810 418 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC007318.2-201ENST00000620999 243 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 MIR134-201ENST00000385258 73 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 RNU2-39P-201ENST00000410604 198 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 RNA5SP492-201ENST00000411330 114 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC127391.1-201ENST00000411737 98 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC092809.3-201ENST00000415453 231 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AL159987.2-201ENST00000432754 307 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC009961.2-201ENST00000435771 251 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC104850.1-201ENST00000435940 476 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 RPS27AP8-201ENST00000452665 445 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 Y_RNA.689-201ENST00000516589 107 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 OR5B19P-201ENST00000531766 928 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AL157871.3-201ENST00000557231 293 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC012414.6-201ENST00000568241 401 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 MTCO3P13-201ENST00000577757 781 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 MIR1273C-201ENST00000578669 77 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC103810.1-201ENST00000579873 453 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 UBL5P2-201ENST00000583788 219 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 OR1M4P-201ENST00000589199 287 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AL590229.1-201ENST00000603497 542 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC119501.1-201ENST00000603646 475 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AC135507.1-201ENST00000607214 561 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 AL133173.2-201ENST00000614270 90 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 U6.99-201ENST00000637524 83 ntBASIC2.89□□□□□ -1.95
VPS33AQ96AX1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
VPS33AQ96AX1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC010329.5-201ENST00000623497 2174 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 RNY4P34-201ENST00000364779 95 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 MIR181B1-201ENST00000385240 110 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 U3.26-201ENST00000391236 204 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC097713.2-201ENST00000430199 356 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC073614.1-201ENST00000438690 650 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 GSTA11P-201ENST00000452866 669 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC110794.1-201ENST00000505816 425 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC098799.2-201ENST00000509466 868 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC117522.1-201ENST00000509821 380 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 MIR4782-201ENST00000577987 79 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 MIR3167-201ENST00000579623 85 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 Z99497.2-201ENST00000603634 310 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 MIR15A-201ENST00000607334 83 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC008147.4-201ENST00000617570 1204 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 AC138932.5-201ENST00000617759 563 ntBASIC2.88□□□□□ -1.95
VPS33AQ96AX1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms